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Jflow: a workflow management system for web applications.
Mariette J, Escudié F, Bardou P, Nabihoudine I, Noirot C, Trotard MS, Gaspin C, Klopp C. Mariette J, et al. Among authors: gaspin c. Bioinformatics. 2016 Feb 1;32(3):456-8. doi: 10.1093/bioinformatics/btv589. Epub 2015 Oct 10. Bioinformatics. 2016. PMID: 26454273 Free PMC article.
Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism.
Boisset S, Geissmann T, Huntzinger E, Fechter P, Bendridi N, Possedko M, Chevalier C, Helfer AC, Benito Y, Jacquier A, Gaspin C, Vandenesch F, Romby P. Boisset S, et al. Among authors: gaspin c. Genes Dev. 2007 Jun 1;21(11):1353-66. doi: 10.1101/gad.423507. Genes Dev. 2007. PMID: 17545468 Free PMC article.
Draft Genome Sequence of Tubulinosema ratisbonensis, a Microsporidian Species Infecting the Model Organism Drosophila melanogaster.
Polonais V, Niehus S, Wawrzyniak I, Franchet A, Gaspin C, Belkorchia A, Reichstadt M, Belser C, Labadie K, Couloux A, Delbac F, Peyretaillade E, Ferrandon D. Polonais V, et al. Among authors: gaspin c. Microbiol Resour Announc. 2019 Aug 1;8(31):e00077-19. doi: 10.1128/MRA.00077-19. Microbiol Resour Announc. 2019. PMID: 31371528 Free PMC article.
mmannot: How to improve small-RNA annotation?
Zytnicki M, Gaspin C. Zytnicki M, et al. Among authors: gaspin c. PLoS One. 2020 May 28;15(5):e0231738. doi: 10.1371/journal.pone.0231738. eCollection 2020. PLoS One. 2020. PMID: 32463818 Free PMC article.
Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.
Plomion C, Aury JM, Amselem J, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Boudet N, Boury C, Canaguier A, Couloux A, Da Silva C, Duplessis S, Ehrenmann F, Estrada-Mairey B, Fouteau S, Francillonne N, Gaspin C, Guichard C, Klopp C, Labadie K, Lalanne C, Le Clainche I, Leplé JC, Le Provost G, Leroy T, Lesur I, Martin F, Mercier J, Michotey C, Murat F, Salin F, Steinbach D, Faivre-Rampant P, Wincker P, Salse J, Quesneville H, Kremer A. Plomion C, et al. Among authors: gaspin c. Mol Ecol Resour. 2016 Jan;16(1):254-65. doi: 10.1111/1755-0998.12425. Epub 2015 May 29. Mol Ecol Resour. 2016. PMID: 25944057
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