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Shared peptide binding of HLA Class I and II alleles associate with cutaneous nevirapine hypersensitivity and identify novel risk alleles.
Pavlos R, McKinnon EJ, Ostrov DA, Peters B, Buus S, Koelle D, Chopra A, Schutte R, Rive C, Redwood A, Restrepo S, Bracey A, Kaever T, Myers P, Speers E, Malaker SA, Shabanowitz J, Jing Y, Gaudieri S, Hunt DF, Carrington M, Haas DW, Mallal S, Phillips EJ. Pavlos R, et al. Among authors: peters b. Sci Rep. 2017 Aug 17;7(1):8653. doi: 10.1038/s41598-017-08876-0. Sci Rep. 2017. PMID: 28819312 Free PMC article.
A community resource benchmarking predictions of peptide binding to MHC-I molecules.
Peters B, Bui HH, Frankild S, Nielson M, Lundegaard C, Kostem E, Basch D, Lamberth K, Harndahl M, Fleri W, Wilson SS, Sidney J, Lund O, Buus S, Sette A. Peters B, et al. PLoS Comput Biol. 2006 Jun 9;2(6):e65. doi: 10.1371/journal.pcbi.0020065. Epub 2006 Jun 9. PLoS Comput Biol. 2006. PMID: 16789818 Free PMC article.
Immune epitope database analysis resource (IEDB-AR).
Zhang Q, Wang P, Kim Y, Haste-Andersen P, Beaver J, Bourne PE, Bui HH, Buus S, Frankild S, Greenbaum J, Lund O, Lundegaard C, Nielsen M, Ponomarenko J, Sette A, Zhu Z, Peters B. Zhang Q, et al. Among authors: peters b. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W513-8. doi: 10.1093/nar/gkn254. Epub 2008 May 31. Nucleic Acids Res. 2008. PMID: 18515843 Free PMC article.
NetMHCpan, a method for MHC class I binding prediction beyond humans.
Hoof I, Peters B, Sidney J, Pedersen LE, Sette A, Lund O, Buus S, Nielsen M. Hoof I, et al. Among authors: peters b. Immunogenetics. 2009 Jan;61(1):1-13. doi: 10.1007/s00251-008-0341-z. Epub 2008 Nov 12. Immunogenetics. 2009. PMID: 19002680 Free PMC article.
Peptide binding predictions for HLA DR, DP and DQ molecules.
Wang P, Sidney J, Kim Y, Sette A, Lund O, Nielsen M, Peters B. Wang P, et al. Among authors: peters b. BMC Bioinformatics. 2010 Nov 22;11:568. doi: 10.1186/1471-2105-11-568. BMC Bioinformatics. 2010. PMID: 21092157 Free PMC article.
Drug hypersensitivity caused by alteration of the MHC-presented self-peptide repertoire.
Ostrov DA, Grant BJ, Pompeu YA, Sidney J, Harndahl M, Southwood S, Oseroff C, Lu S, Jakoncic J, de Oliveira CA, Yang L, Mei H, Shi L, Shabanowitz J, English AM, Wriston A, Lucas A, Phillips E, Mallal S, Grey HM, Sette A, Hunt DF, Buus S, Peters B. Ostrov DA, et al. Among authors: peters b. Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):9959-64. doi: 10.1073/pnas.1207934109. Epub 2012 May 29. Proc Natl Acad Sci U S A. 2012. PMID: 22645359 Free PMC article.
1,813 results