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Comparative modeling reveals the molecular determinants of aneuploidy fitness cost in a wild yeast model.
Rojas J, Hose J, Auguste Dutcher H, Place M, Wolters JF, Hittinger CT, Gasch AP. Rojas J, et al. Among authors: hittinger ct. bioRxiv [Preprint]. 2024 Apr 13:2024.04.09.588778. doi: 10.1101/2024.04.09.588778. bioRxiv. 2024. Update in: Cell Genom. 2024 Oct 9;4(10):100656. doi: 10.1016/j.xgen.2024.100656 PMID: 38645209 Free PMC article. Updated. Preprint.
Unique trajectory of gene family evolution from genomic analysis of nearly all known species in an ancient yeast lineage.
Feng B, Li Y, Liu H, Steenwyk JL, David KT, Tian X, Xu B, Gonçalves C, Opulente DA, LaBella AL, Harrison MC, Wolters JF, Shao S, Chen Z, Fisher KJ, Groenewald M, Hittinger CT, Shen XX, Rokas A, Zhou X, Li Y. Feng B, et al. Among authors: hittinger ct. bioRxiv [Preprint]. 2024 Jun 6:2024.06.05.597512. doi: 10.1101/2024.06.05.597512. bioRxiv. 2024. PMID: 38895429 Free PMC article. Preprint.
Genomic factors shaping codon usage across the Saccharomycotina subphylum.
Zavala B, Dineen L, Fisher KJ, Opulente DA, Harrison MC, Wolters JF, Shen XX, Zhou X, Groenewald M, Hittinger CT, Rokas A, LaBella AL. Zavala B, et al. Among authors: hittinger ct. bioRxiv [Preprint]. 2024 May 24:2024.05.23.595506. doi: 10.1101/2024.05.23.595506. bioRxiv. 2024. Update in: G3 (Bethesda). 2024 Nov 6;14(11):jkae207. doi: 10.1093/g3journal/jkae207 PMID: 38826271 Free PMC article. Updated. Preprint.
Genomics and the making of yeast biodiversity.
Hittinger CT, Rokas A, Bai FY, Boekhout T, Gonçalves P, Jeffries TW, Kominek J, Lachance MA, Libkind D, Rosa CA, Sampaio JP, Kurtzman CP. Hittinger CT, et al. Curr Opin Genet Dev. 2015 Dec;35:100-9. doi: 10.1016/j.gde.2015.10.008. Epub 2015 Nov 30. Curr Opin Genet Dev. 2015. PMID: 26649756 Free PMC article. Review.
Genomic analysis and D-xylose fermentation of three novel Spathaspora species: Spathaspora girioi sp. nov., Spathaspora hagerdaliae f. a., sp. nov. and Spathaspora gorwiae f. a., sp. nov.
Lopes MR, Morais CG, Kominek J, Cadete RM, Soares MA, Uetanabaro AP, Fonseca C, Lachance MA, Hittinger CT, Rosa CA. Lopes MR, et al. Among authors: hittinger ct. FEMS Yeast Res. 2016 Jun;16(4):fow044. doi: 10.1093/femsyr/fow044. Epub 2016 May 1. FEMS Yeast Res. 2016. PMID: 27188884
Comparative genomics of biotechnologically important yeasts.
Riley R, Haridas S, Wolfe KH, Lopes MR, Hittinger CT, Göker M, Salamov AA, Wisecaver JH, Long TM, Calvey CH, Aerts AL, Barry KW, Choi C, Clum A, Coughlan AY, Deshpande S, Douglass AP, Hanson SJ, Klenk HP, LaButti KM, Lapidus A, Lindquist EA, Lipzen AM, Meier-Kolthoff JP, Ohm RA, Otillar RP, Pangilinan JL, Peng Y, Rokas A, Rosa CA, Scheuner C, Sibirny AA, Slot JC, Stielow JB, Sun H, Kurtzman CP, Blackwell M, Grigoriev IV, Jeffries TW. Riley R, et al. Among authors: hittinger ct. Proc Natl Acad Sci U S A. 2016 Aug 30;113(35):9882-7. doi: 10.1073/pnas.1603941113. Epub 2016 Aug 17. Proc Natl Acad Sci U S A. 2016. PMID: 27535936 Free PMC article.
132 results