Taherzadeh G - Search Results

1

Success: evolutionary and structural properties of amino acids prove effective for succinylation site prediction.

López Y, Sharma A, Dehzangi A, Lal SP, Taherzadeh G, Sattar A, Tsunoda T. López Y, et al. Among authors: taherzadeh g. BMC Genomics. 2018 Jan 19;19(Suppl 1):923. doi: 10.1186/s12864-017-4336-8. BMC Genomics. 2018. PMID: 29363424 Free PMC article.

2

SumSec: Accurate Prediction of Sumoylation Sites Using Predicted Secondary Structure.

Dehzangi A, López Y, Taherzadeh G, Sharma A, Tsunoda T. Dehzangi A, et al. Among authors: taherzadeh g. Molecules. 2018 Dec 10;23(12):3260. doi: 10.3390/molecules23123260. Molecules. 2018. PMID: 30544729 Free PMC article.

3

SucStruct: Prediction of succinylated lysine residues by using structural properties of amino acids.

López Y, Dehzangi A, Lal SP, Taherzadeh G, Michaelson J, Sattar A, Tsunoda T, Sharma A. López Y, et al. Among authors: taherzadeh g. Anal Biochem. 2017 Jun 15;527:24-32. doi: 10.1016/j.ab.2017.03.021. Epub 2017 Mar 28. Anal Biochem. 2017. PMID: 28363440

4

PSSM-Suc: Accurately predicting succinylation using position specific scoring matrix into bigram for feature extraction.

Dehzangi A, López Y, Lal SP, Taherzadeh G, Michaelson J, Sattar A, Tsunoda T, Sharma A. Dehzangi A, et al. Among authors: taherzadeh g. J Theor Biol. 2017 Jul 21;425:97-102. doi: 10.1016/j.jtbi.2017.05.005. Epub 2017 May 5. J Theor Biol. 2017. PMID: 28483566

5

Improving succinylation prediction accuracy by incorporating the secondary structure via helix, strand and coil, and evolutionary information from profile bigrams.

Dehzangi A, López Y, Lal SP, Taherzadeh G, Sattar A, Tsunoda T, Sharma A. Dehzangi A, et al. Among authors: taherzadeh g. PLoS One. 2018 Feb 12;13(2):e0191900. doi: 10.1371/journal.pone.0191900. eCollection 2018. PLoS One. 2018. PMID: 29432431 Free PMC article.

6

SPRINT-Gly: predicting N- and O-linked glycosylation sites of human and mouse proteins by using sequence and predicted structural properties.

Taherzadeh G, Dehzangi A, Golchin M, Zhou Y, Campbell MP. Taherzadeh G, et al. Bioinformatics. 2019 Oct 15;35(20):4140-4146. doi: 10.1093/bioinformatics/btz215. Bioinformatics. 2019. PMID: 30903686

7

Predicting protein-peptide binding sites with a deep convolutional neural network.

Wardah W, Dehzangi A, Taherzadeh G, Rashid MA, Khan MGM, Tsunoda T, Sharma A. Wardah W, et al. Among authors: taherzadeh g. J Theor Biol. 2020 Jul 7;496:110278. doi: 10.1016/j.jtbi.2020.110278. Epub 2020 Apr 13. J Theor Biol. 2020. PMID: 32298689

8

Accurately Predicting Glutarylation Sites Using Sequential Bi-Peptide-Based Evolutionary Features.

Arafat ME, Ahmad MW, Shovan SM, Dehzangi A, Dipta SR, Hasan MAM, Taherzadeh G, Shatabda S, Sharma A. Arafat ME, et al. Among authors: taherzadeh g. Genes (Basel). 2020 Aug 31;11(9):1023. doi: 10.3390/genes11091023. Genes (Basel). 2020. PMID: 32878321 Free PMC article.

9

SEMal: Accurate protein malonylation site predictor using structural and evolutionary information.

Dipta SR, Taherzadeh G, Ahmad MW, Arafat ME, Shatabda S, Dehzangi A. Dipta SR, et al. Among authors: taherzadeh g. Comput Biol Med. 2020 Oct;125:104022. doi: 10.1016/j.compbiomed.2020.104022. Epub 2020 Sep 29. Comput Biol Med. 2020. PMID: 33022522

10

Accurate prediction of RNA 5-hydroxymethylcytosine modification by utilizing novel position-specific gapped k-mer descriptors.

Ahmed S, Hossain Z, Uddin M, Taherzadeh G, Sharma A, Shatabda S, Dehzangi A. Ahmed S, et al. Among authors: taherzadeh g. Comput Struct Biotechnol J. 2020 Nov 12;18:3528-3538. doi: 10.1016/j.csbj.2020.10.032. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 33304452 Free PMC article.

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