Pawitan Y - Search Results

1

Isoform-level gene expression patterns in single-cell RNA-sequencing data.

Vu TN, Wills QF, Kalari KR, Niu N, Wang L, Pawitan Y, Rantalainen M. Vu TN, et al. Among authors: pawitan y. Bioinformatics. 2018 Jul 15;34(14):2392-2400. doi: 10.1093/bioinformatics/bty100. Bioinformatics. 2018. PMID: 29490015 Free PMC article.

2

Gene expression profiling for prognosis using Cox regression.

Pawitan Y, Bjöhle J, Wedren S, Humphreys K, Skoog L, Huang F, Amler L, Shaw P, Hall P, Bergh J. Pawitan Y, et al. Stat Med. 2004 Jun 15;23(11):1767-80. doi: 10.1002/sim.1769. Stat Med. 2004. PMID: 15160407

3

Correlation test to assess low-level processing of high-density oligonucleotide microarray data.

Ploner A, Miller LD, Hall P, Bergh J, Pawitan Y. Ploner A, et al. Among authors: pawitan y. BMC Bioinformatics. 2005 Mar 31;6:80. doi: 10.1186/1471-2105-6-80. BMC Bioinformatics. 2005. PMID: 15799785 Free PMC article.

4

False discovery rate, sensitivity and sample size for microarray studies.

Pawitan Y, Michiels S, Koscielny S, Gusnanto A, Ploner A. Pawitan Y, et al. Bioinformatics. 2005 Jul 1;21(13):3017-24. doi: 10.1093/bioinformatics/bti448. Epub 2005 Apr 19. Bioinformatics. 2005. PMID: 15840707

5

Bias in the estimation of false discovery rate in microarray studies.

Pawitan Y, Murthy KR, Michiels S, Ploner A. Pawitan Y, et al. Bioinformatics. 2005 Oct 15;21(20):3865-72. doi: 10.1093/bioinformatics/bti626. Epub 2005 Aug 16. Bioinformatics. 2005. PMID: 16105901

6

Multidimensional local false discovery rate for microarray studies.

Ploner A, Calza S, Gusnanto A, Pawitan Y. Ploner A, et al. Among authors: pawitan y. Bioinformatics. 2006 Mar 1;22(5):556-65. doi: 10.1093/bioinformatics/btk013. Epub 2005 Dec 20. Bioinformatics. 2006. PMID: 16368770

7

Finding regions of significance in SELDI measurements for identifying protein biomarkers.

Tan CS, Ploner A, Quandt A, Lehtiö J, Pawitan Y. Tan CS, et al. Among authors: pawitan y. Bioinformatics. 2006 Jun 15;22(12):1515-23. doi: 10.1093/bioinformatics/btl106. Epub 2006 Mar 27. Bioinformatics. 2006. PMID: 16567365

8

Estimation of false discovery proportion under general dependence.

Pawitan Y, Calza S, Ploner A. Pawitan Y, et al. Bioinformatics. 2006 Dec 15;22(24):3025-31. doi: 10.1093/bioinformatics/btl527. Epub 2006 Oct 17. Bioinformatics. 2006. PMID: 17046978

9

Detecting differential expression in microarray data: comparison of optimal procedures.

Perelman E, Ploner A, Calza S, Pawitan Y. Perelman E, et al. Among authors: pawitan y. BMC Bioinformatics. 2007 Jan 26;8:28. doi: 10.1186/1471-2105-8-28. BMC Bioinformatics. 2007. PMID: 17257426 Free PMC article.

10

Normalization of oligonucleotide arrays based on the least-variant set of genes.

Calza S, Valentini D, Pawitan Y. Calza S, et al. Among authors: pawitan y. BMC Bioinformatics. 2008 Mar 5;9:140. doi: 10.1186/1471-2105-9-140. BMC Bioinformatics. 2008. PMID: 18318917 Free PMC article.

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