Orengo C - Search Results

1

Choosing the Best Enzyme Complex Structure Made Easy.

Das S, Orengo C. Das S, et al. Among authors: orengo c. Structure. 2018 Apr 3;26(4):528-530. doi: 10.1016/j.str.2018.03.009. Structure. 2018. PMID: 29617649 Free article.

2

The CATH hierarchy revisited-structural divergence in domain superfamilies and the continuity of fold space.

Cuff A, Redfern OC, Greene L, Sillitoe I, Lewis T, Dibley M, Reid A, Pearl F, Dallman T, Todd A, Garratt R, Thornton J, Orengo C. Cuff A, et al. Among authors: orengo c. Structure. 2009 Aug 12;17(8):1051-62. doi: 10.1016/j.str.2009.06.015. Structure. 2009. PMID: 19679085 Free PMC article.

3

Transient protein-protein interactions: structural, functional, and network properties.

Perkins JR, Diboun I, Dessailly BH, Lees JG, Orengo C. Perkins JR, et al. Among authors: orengo c. Structure. 2010 Oct 13;18(10):1233-43. doi: 10.1016/j.str.2010.08.007. Structure. 2010. PMID: 20947012 Free article. Review.

4

Novel Computational Protocols for Functionally Classifying and Characterising Serine Beta-Lactamases.

Lee D, Das S, Dawson NL, Dobrijevic D, Ward J, Orengo C. Lee D, et al. Among authors: orengo c. PLoS Comput Biol. 2016 Jun 22;12(6):e1004926. doi: 10.1371/journal.pcbi.1004926. eCollection 2016 Jun. PLoS Comput Biol. 2016. PMID: 27332861 Free PMC article.

5

An overview of comparative modelling and resources dedicated to large-scale modelling of genome sequences.

Lam SD, Das S, Sillitoe I, Orengo C. Lam SD, et al. Among authors: orengo c. Acta Crystallogr D Struct Biol. 2017 Aug 1;73(Pt 8):628-640. doi: 10.1107/S2059798317008920. Epub 2017 Jul 28. Acta Crystallogr D Struct Biol. 2017. PMID: 28777078 Free PMC article. Review.

6

Protein CoAlation and antioxidant function of coenzyme A in prokaryotic cells.

Tsuchiya Y, Zhyvoloup A, Baković J, Thomas N, Yu BYK, Das S, Orengo C, Newell C, Ward J, Saladino G, Comitani F, Gervasio FL, Malanchuk OM, Khoruzhenko AI, Filonenko V, Peak-Chew SY, Skehel M, Gout I. Tsuchiya Y, et al. Among authors: orengo c. Biochem J. 2018 Jun 6;475(11):1909-1937. doi: 10.1042/BCJ20180043. Biochem J. 2018. PMID: 29626155 Free PMC article.

7

Emerging concepts in pseudoenzyme classification, evolution, and signaling.

Ribeiro AJM, Das S, Dawson N, Zaru R, Orchard S, Thornton JM, Orengo C, Zeqiraj E, Murphy JM, Eyers PA. Ribeiro AJM, et al. Among authors: orengo c. Sci Signal. 2019 Aug 13;12(594):eaat9797. doi: 10.1126/scisignal.aat9797. Sci Signal. 2019. PMID: 31409758 Review.

8

PDBe-KB: a community-driven resource for structural and functional annotations.

PDBe-KB consortium. PDBe-KB consortium. Nucleic Acids Res. 2020 Jan 8;48(D1):D344-D353. doi: 10.1093/nar/gkz853. Nucleic Acids Res. 2020. PMID: 31584092 Free PMC article.

9

CATH functional families predict functional sites in proteins.

Das S, Scholes HM, Sen N, Orengo C. Das S, et al. Among authors: orengo c. Bioinformatics. 2021 May 23;37(8):1099-1106. doi: 10.1093/bioinformatics/btaa937. Bioinformatics. 2021. PMID: 33135053 Free PMC article.

10

Profiling the Site of Protein CoAlation and Coenzyme A Stabilization Interactions.

Tossounian MA, Baczynska M, Dalton W, Newell C, Ma Y, Das S, Semelak JA, Estrin DA, Filonenko V, Trujillo M, Peak-Chew SY, Skehel M, Fraternali F, Orengo C, Gout I. Tossounian MA, et al. Among authors: orengo c. Antioxidants (Basel). 2022 Jul 14;11(7):1362. doi: 10.3390/antiox11071362. Antioxidants (Basel). 2022. PMID: 35883853 Free PMC article.

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