Nesbitt DJ - Search Results

1

Incorporation of isotopic, fluorescent, and heavy-atom-modified nucleotides into RNAs by position-selective labeling of RNA.

Liu Y, Holmstrom E, Yu P, Tan K, Zuo X, Nesbitt DJ, Sousa R, Stagno JR, Wang YX. Liu Y, et al. Among authors: nesbitt dj. Nat Protoc. 2018 May;13(5):987-1005. doi: 10.1038/nprot.2018.002. Epub 2018 Apr 12. Nat Protoc. 2018. PMID: 29651055 Free PMC article.

2

Real-Time Infrared Overtone Laser Control of Temperature in Picoliter H(2)O Samples: "Nanobathtubs" for Single Molecule Microscopy.

Holmstrom ED, Nesbitt DJ. Holmstrom ED, et al. Among authors: nesbitt dj. J Phys Chem Lett. 2010;1(15):2264-2268. doi: 10.1021/jz100663e. J Phys Chem Lett. 2010. PMID: 21814589 Free PMC article.

3

Entropic origin of Mg2+-facilitated RNA folding.

Fiore JL, Holmstrom ED, Nesbitt DJ. Fiore JL, et al. Among authors: nesbitt dj. Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):2902-7. doi: 10.1073/pnas.1114859109. Epub 2012 Feb 1. Proc Natl Acad Sci U S A. 2012. PMID: 22308376 Free PMC article.

4

Thermodynamic origins of monovalent facilitated RNA folding.

Holmstrom ED, Fiore JL, Nesbitt DJ. Holmstrom ED, et al. Among authors: nesbitt dj. Biochemistry. 2012 May 8;51(18):3732-43. doi: 10.1021/bi201420a. Epub 2012 Apr 23. Biochemistry. 2012. PMID: 22448852 Free PMC article.

5

The role of counterion valence and size in GAAA tetraloop-receptor docking/undocking kinetics.

Fiore JL, Holmstrom ED, Fiegland LR, Hodak JH, Nesbitt DJ. Fiore JL, et al. Among authors: nesbitt dj. J Mol Biol. 2012 Oct 19;423(2):198-216. doi: 10.1016/j.jmb.2012.07.006. Epub 2012 Jul 14. J Mol Biol. 2012. PMID: 22796627

6

Single-molecule kinetics reveal cation-promoted DNA duplex formation through ordering of single-stranded helices.

Dupuis NF, Holmstrom ED, Nesbitt DJ. Dupuis NF, et al. Among authors: nesbitt dj. Biophys J. 2013 Aug 6;105(3):756-66. doi: 10.1016/j.bpj.2013.05.061. Biophys J. 2013. PMID: 23931323 Free PMC article.

7

Pulsed IR heating studies of single-molecule DNA duplex dissociation kinetics and thermodynamics.

Holmstrom ED, Dupuis NF, Nesbitt DJ. Holmstrom ED, et al. Among authors: nesbitt dj. Biophys J. 2014 Jan 7;106(1):220-31. doi: 10.1016/j.bpj.2013.11.008. Biophys J. 2014. PMID: 24411254 Free PMC article.

8

Single-molecule fluorescence resonance energy transfer studies of the human telomerase RNA pseudoknot: temperature-/urea-dependent folding kinetics and thermodynamics.

Holmstrom ED, Nesbitt DJ. Holmstrom ED, et al. Among authors: nesbitt dj. J Phys Chem B. 2014 Apr 10;118(14):3853-63. doi: 10.1021/jp501893c. Epub 2014 Mar 28. J Phys Chem B. 2014. PMID: 24617561 Free PMC article.

9

Molecular-crowding effects on single-molecule RNA folding/unfolding thermodynamics and kinetics.

Dupuis NF, Holmstrom ED, Nesbitt DJ. Dupuis NF, et al. Among authors: nesbitt dj. Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8464-9. doi: 10.1073/pnas.1316039111. Epub 2014 May 21. Proc Natl Acad Sci U S A. 2014. PMID: 24850865 Free PMC article.

10

Single-molecule conformational dynamics of a biologically functional hydroxocobalamin riboswitch.

Holmstrom ED, Polaski JT, Batey RT, Nesbitt DJ. Holmstrom ED, et al. Among authors: nesbitt dj. J Am Chem Soc. 2014 Dec 3;136(48):16832-43. doi: 10.1021/ja5076184. Epub 2014 Nov 19. J Am Chem Soc. 2014. PMID: 25325398 Free PMC article.

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