Thimmapuram J - Search Results

1

Cross-site comparison of ribosomal depletion kits for Illumina RNAseq library construction.

Herbert ZT, Kershner JP, Butty VL, Thimmapuram J, Choudhari S, Alekseyev YO, Fan J, Podnar JW, Wilcox E, Gipson J, Gillaspy A, Jepsen K, BonDurant SS, Morris K, Berkeley M, LeClerc A, Simpson SD, Sommerville G, Grimmett L, Adams M, Levine SS. Herbert ZT, et al. Among authors: thimmapuram j. BMC Genomics. 2018 Mar 15;19(1):199. doi: 10.1186/s12864-018-4585-1. BMC Genomics. 2018. PMID: 29703133 Free PMC article.

2

Transcriptomic and proteomic dynamics in the metabolism of a diazotrophic cyanobacterium, Cyanothece sp. PCC 7822 during a diurnal light-dark cycle.

Welkie D, Zhang X, Markillie ML, Taylor R, Orr G, Jacobs J, Bhide K, Thimmapuram J, Gritsenko M, Mitchell H, Smith RD, Sherman LA. Welkie D, et al. Among authors: thimmapuram j. BMC Genomics. 2014 Dec 29;15(1):1185. doi: 10.1186/1471-2164-15-1185. BMC Genomics. 2014. PMID: 25547186 Free PMC article.

3

Multisite Evaluation of Next-Generation Methods for Small RNA Quantification.

Herbert ZT, Thimmapuram J, Xie S, Kershner JP, Kolling FW, Ringelberg CS, LeClerc A, Alekseyev YO, Fan J, Podnar JW, Stevenson HS, Sommerville G, Gupta S, Berkeley M, Koeman J, Perera A, Scott AR, Grenier JK, Malik J, Ashton JM, Pivarski KL, Wang X, Kuffel G, Mesa TE, Smith AT, Shen J, Takata Y, Volkert TL, Love JA, Zhang Y, Wang J, Xuei X, Adams M, Levine SS. Herbert ZT, et al. Among authors: thimmapuram j. J Biomol Tech. 2020 Jul;31(2):47-56. doi: 10.7171/jbt.20-3102-001. J Biomol Tech. 2020. PMID: 31966025 Free PMC article.

4

Mammary transcriptome reveals cell maintenance and protein turnover support milk synthesis in early-lactation cows.

Beckett L, Xie S, Thimmapuram J, Tucker HA, Donkin SS, Casey T. Beckett L, et al. Among authors: thimmapuram j. Physiol Genomics. 2020 Sep 1;52(9):435-450. doi: 10.1152/physiolgenomics.00046.2020. Epub 2020 Aug 3. Physiol Genomics. 2020. PMID: 32744883

5

Changes in the core endophytic mycobiome of carrot taproots in response to crop management and genotype.

Abdelrazek S, Choudhari S, Thimmapuram J, Simon P, Colley M, Mengiste T, Hoagland L. Abdelrazek S, et al. Among authors: thimmapuram j. Sci Rep. 2020 Aug 13;10(1):13685. doi: 10.1038/s41598-020-70683-x. Sci Rep. 2020. PMID: 32792547 Free PMC article.

6

RNA sequencing identifies transcriptional changes in the rabbit larynx in response to low humidity challenge.

Bailey TW, Dos Santos AP, do Nascimento NC, Xie S, Thimmapuram J, Sivasankar MP, Cox A. Bailey TW, et al. Among authors: thimmapuram j. BMC Genomics. 2020 Dec 11;21(1):888. doi: 10.1186/s12864-020-07301-7. BMC Genomics. 2020. PMID: 33308144 Free PMC article.

7

Metatranscriptomic profiles of Eastern subterranean termites, Reticulitermes flavipes (Kollar) fed on second generation feedstocks.

Rajarapu SP, Shreve JT, Bhide KP, Thimmapuram J, Scharf ME. Rajarapu SP, et al. Among authors: thimmapuram j. BMC Genomics. 2015 Apr 22;16(1):332. doi: 10.1186/s12864-015-1502-8. BMC Genomics. 2015. PMID: 25896921 Free PMC article.

8

Effect of high-fat diet on secreted milk transcriptome in midlactation mice.

Chen Y, Wang J, Yang S, Utturkar S, Crodian J, Cummings S, Thimmapuram J, San Miguel P, Kuang S, Gribskov M, Plaut K, Casey T. Chen Y, et al. Among authors: thimmapuram j. Physiol Genomics. 2017 Dec 1;49(12):747-762. doi: 10.1152/physiolgenomics.00080.2017. Epub 2017 Nov 1. Physiol Genomics. 2017. PMID: 29093195

9

Analyses of methylomes of upland and lowland switchgrass (Panicum virgatum) ecotypes using MeDIP-seq and BS-seq.

Dworkin M, Xie S, Saha M, Thimmapuram J, Kalavacharla VK. Dworkin M, et al. Among authors: thimmapuram j. BMC Genomics. 2017 Nov 7;18(1):851. doi: 10.1186/s12864-017-4218-0. BMC Genomics. 2017. PMID: 29115936 Free PMC article.

10

Global transcriptional differences in myokine and inflammatory genes in muscle of mature steer progeny are related to maternal lactation diet and muscle composition.

Casey TM, Walker JF, Bhide K, Thimmapuram J, Schoonmaker JP. Casey TM, et al. Among authors: thimmapuram j. Physiol Genomics. 2018 Oct 1;50(10):884-892. doi: 10.1152/physiolgenomics.00060.2018. Epub 2018 Aug 3. Physiol Genomics. 2018. PMID: 30074426

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