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CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories.
Bioinformatics. 2018 Oct 15;34(20):3586-3588. doi: 10.1093/bioinformatics/bty386.
Bioinformatics. 2018.
PMID: 29741570
Free PMC article.
Interactive exploration of ligand transportation through protein tunnels.
Furmanová K, Jarešová M, Byška J, Jurčík A, Parulek J, Hauser H, Kozlíková B.
Furmanová K, et al. Among authors: jurcik a.
BMC Bioinformatics. 2017 Feb 15;18(Suppl 2):22. doi: 10.1186/s12859-016-1448-0.
BMC Bioinformatics. 2017.
PMID: 28251878
Free PMC article.
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Visual Analysis of Protein-Protein Interaction Docking Models Using COZOID Tool.
Byska J, Jurcik A, Furmanova K, Kozlikova B, Palecek JJ.
Byska J, et al. Among authors: jurcik a.
Methods Mol Biol. 2020;2074:81-94. doi: 10.1007/978-1-4939-9873-9_7.
Methods Mol Biol. 2020.
PMID: 31583632
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Multiscale Visual Drilldown for the Analysis of Large Ensembles of Multi-Body Protein Complexes.
Furmanova K, Jurcik A, Kozlikova B, Hauser H, Byska J.
Furmanova K, et al. Among authors: jurcik a.
IEEE Trans Vis Comput Graph. 2020 Jan;26(1):843-852. doi: 10.1109/TVCG.2019.2934333. Epub 2019 Aug 19.
IEEE Trans Vis Comput Graph. 2020.
PMID: 31425101
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