Kupczok A - Search Results

1

Bioinformatics Meets Virology: The European Virus Bioinformatics Center's Second Annual Meeting.

Ibrahim B, Arkhipova K, Andeweg AC, Posada-Céspedes S, Enault F, Gruber A, Koonin EV, Kupczok A, Lemey P, McHardy AC, McMahon DP, Pickett BE, Robertson DL, Scheuermann RH, Zhernakova A, Zwart MP, Schönhuth A, Dutilh BE, Marz M. Ibrahim B, et al. Among authors: kupczok a. Viruses. 2018 May 14;10(5):256. doi: 10.3390/v10050256. Viruses. 2018. PMID: 29757994 Free PMC article.

2

A Phage Protein Aids Bacterial Symbionts in Eukaryote Immune Evasion.

Jahn MT, Arkhipova K, Markert SM, Stigloher C, Lachnit T, Pita L, Kupczok A, Ribes M, Stengel ST, Rosenstiel P, Dutilh BE, Hentschel U. Jahn MT, et al. Among authors: kupczok a. Cell Host Microbe. 2019 Oct 9;26(4):542-550.e5. doi: 10.1016/j.chom.2019.08.019. Epub 2019 Sep 24. Cell Host Microbe. 2019. PMID: 31561965 Free article.

3

Rates of Molecular Evolution in a Marine Synechococcus Phage Lineage.

Kupczok A, Dagan T. Kupczok A, et al. Viruses. 2019 Aug 6;11(8):720. doi: 10.3390/v11080720. Viruses. 2019. PMID: 31390807 Free PMC article.

4

Characterization of Blf4, an Archaeal Lytic Virus Targeting a Member of the Methanomicrobiales.

Weidenbach K, Wolf S, Kupczok A, Kern T, Fischer MA, Reetz J, Urbańska N, Künzel S, Schmitz RA, Rother M. Weidenbach K, et al. Among authors: kupczok a. Viruses. 2021 Sep 26;13(10):1934. doi: 10.3390/v13101934. Viruses. 2021. PMID: 34696364 Free PMC article.

5

Rates of Mutation and Recombination in Siphoviridae Phage Genome Evolution over Three Decades.

Kupczok A, Neve H, Huang KD, Hoeppner MP, Heller KJ, Franz CMAP, Dagan T. Kupczok A, et al. Mol Biol Evol. 2018 May 1;35(5):1147-1159. doi: 10.1093/molbev/msy027. Mol Biol Evol. 2018. PMID: 29688542 Free PMC article.

6

Recombination Signal in Mycobacterium tuberculosis Stems from Reference-guided Assemblies and Alignment Artefacts.

Godfroid M, Dagan T, Kupczok A. Godfroid M, et al. Among authors: kupczok a. Genome Biol Evol. 2018 Aug 1;10(8):1920-1926. doi: 10.1093/gbe/evy143. Genome Biol Evol. 2018. PMID: 30010866 Free PMC article.

7

The Contribution of Genetic Recombination to CRISPR Array Evolution.

Kupczok A, Landan G, Dagan T. Kupczok A, et al. Genome Biol Evol. 2015 Jun 16;7(7):1925-39. doi: 10.1093/gbe/evv113. Genome Biol Evol. 2015. PMID: 26085541 Free PMC article.

8

Insertion and deletion evolution reflects antibiotics selection pressure in a Mycobacterium tuberculosis outbreak.

Godfroid M, Dagan T, Merker M, Kohl TA, Diel R, Maurer FP, Niemann S, Kupczok A. Godfroid M, et al. Among authors: kupczok a. PLoS Pathog. 2020 Sep 30;16(9):e1008357. doi: 10.1371/journal.ppat.1008357. eCollection 2020 Sep. PLoS Pathog. 2020. PMID: 32997707 Free PMC article.

9

Pangenome Evolution in Environmentally Transmitted Symbionts of Deep-Sea Mussels Is Governed by Vertical Inheritance.

Romero Picazo D, Werner A, Dagan T, Kupczok A. Romero Picazo D, et al. Among authors: kupczok a. Genome Biol Evol. 2022 Jul 2;14(7):evac098. doi: 10.1093/gbe/evac098. Genome Biol Evol. 2022. PMID: 35731940 Free PMC article.

10

Horizontally transmitted symbiont populations in deep-sea mussels are genetically isolated.

Romero Picazo D, Dagan T, Ansorge R, Petersen JM, Dubilier N, Kupczok A. Romero Picazo D, et al. Among authors: kupczok a. ISME J. 2019 Dec;13(12):2954-2968. doi: 10.1038/s41396-019-0475-z. Epub 2019 Aug 8. ISME J. 2019. PMID: 31395952 Free PMC article.

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