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RNA helicase-dependent gene looping impacts messenger RNA processing.
Terrone S, Valat J, Fontrodona N, Giraud G, Claude JB, Combe E, Lapendry A, Polvèche H, Ameur LB, Duvermy A, Modolo L, Bernard P, Mortreux F, Auboeuf D, Bourgeois CF. Terrone S, et al. Nucleic Acids Res. 2022 Sep 9;50(16):9226-9246. doi: 10.1093/nar/gkac717. Nucleic Acids Res. 2022. PMID: 36039747 Free PMC article.
Complementarity of assembly-first and mapping-first approaches for alternative splicing annotation and differential analysis from RNAseq data.
Benoit-Pilven C, Marchet C, Chautard E, Lima L, Lambert MP, Sacomoto G, Rey A, Cologne A, Terrone S, Dulaurier L, Claude JB, Bourgeois CF, Auboeuf D, Lacroix V. Benoit-Pilven C, et al. Among authors: terrone s. Sci Rep. 2018 Mar 9;8(1):4307. doi: 10.1038/s41598-018-21770-7. Sci Rep. 2018. PMID: 29523794 Free PMC article.