Creevey CJ - Search Results

1

Meta-proteomics of rumen microbiota indicates niche compartmentalisation and functional dominance in a limited number of metabolic pathways between abundant bacteria.

Hart EH, Creevey CJ, Hitch T, Kingston-Smith AH. Hart EH, et al. Among authors: creevey cj. Sci Rep. 2018 Jul 12;8(1):10504. doi: 10.1038/s41598-018-28827-7. Sci Rep. 2018. PMID: 30002438 Free PMC article.

2

Improving Orthologous Signal and Model Fit in Datasets Addressing the Root of the Animal Phylogeny.

McCarthy CGP, Mulhair PO, Siu-Ting K, Creevey CJ, O'Connell MJ. McCarthy CGP, et al. Among authors: creevey cj. Mol Biol Evol. 2023 Jan 4;40(1):msac276. doi: 10.1093/molbev/msac276. Mol Biol Evol. 2023. PMID: 36649189 Free PMC article.

3

Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes.

Schiffer PH, Danchin EGJ, Burnell AM, Creevey CJ, Wong S, Dix I, O'Mahony G, Culleton BA, Rancurel C, Stier G, Martínez-Salazar EA, Marconi A, Trivedi U, Kroiher M, Thorne MAS, Schierenberg E, Wiehe T, Blaxter M. Schiffer PH, et al. Among authors: creevey cj. iScience. 2019 Nov 22;21:587-602. doi: 10.1016/j.isci.2019.10.039. Epub 2019 Oct 24. iScience. 2019. PMID: 31759330 Free PMC article.

4

Genome sequence of Ensifer adhaerens OV14 provides insights into its ability as a novel vector for the genetic transformation of plant genomes.

Rudder S, Doohan F, Creevey CJ, Wendt T, Mullins E. Rudder S, et al. Among authors: creevey cj. BMC Genomics. 2014 Apr 7;15:268. doi: 10.1186/1471-2164-15-268. BMC Genomics. 2014. PMID: 24708309 Free PMC article.

5

Determining the culturability of the rumen bacterial microbiome.

Creevey CJ, Kelly WJ, Henderson G, Leahy SC. Creevey CJ, et al. Microb Biotechnol. 2014 Sep;7(5):467-79. doi: 10.1111/1751-7915.12141. Epub 2014 Jul 1. Microb Biotechnol. 2014. PMID: 24986151 Free PMC article.

6

Temporal dynamics of the metabolically active rumen bacteria colonizing fresh perennial ryegrass.

Huws SA, Edwards JE, Creevey CJ, Rees Stevens P, Lin W, Girdwood SE, Pachebat JA, Kingston-Smith AH. Huws SA, et al. Among authors: creevey cj. FEMS Microbiol Ecol. 2016 Jan;92(1):fiv137. doi: 10.1093/femsec/fiv137. Epub 2015 Nov 4. FEMS Microbiol Ecol. 2016. PMID: 26542074

7

Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome.

Rubino F, Carberry C, M Waters S, Kenny D, McCabe MS, Creevey CJ. Rubino F, et al. Among authors: creevey cj. ISME J. 2017 Apr;11(4):932-944. doi: 10.1038/ismej.2016.172. Epub 2017 Jan 13. ISME J. 2017. PMID: 28085156 Free PMC article.

8

Deep sequence analysis reveals the ovine rumen as a reservoir of antibiotic resistance genes.

Hitch TCA, Thomas BJ, Friedersdorff JCA, Ougham H, Creevey CJ. Hitch TCA, et al. Among authors: creevey cj. Environ Pollut. 2018 Apr;235:571-575. doi: 10.1016/j.envpol.2017.12.067. Epub 2018 Jan 11. Environ Pollut. 2018. PMID: 29331890 Free article.

9

Spherical: an iterative workflow for assembling metagenomic datasets.

Hitch TCA, Creevey CJ. Hitch TCA, et al. Among authors: creevey cj. BMC Bioinformatics. 2018 Jan 24;19(1):20. doi: 10.1186/s12859-018-2028-2. BMC Bioinformatics. 2018. PMID: 29361904 Free PMC article.

10

CowPI: A Rumen Microbiome Focussed Version of the PICRUSt Functional Inference Software.

Wilkinson TJ, Huws SA, Edwards JE, Kingston-Smith AH, Siu-Ting K, Hughes M, Rubino F, Friedersdorff M, Creevey CJ. Wilkinson TJ, et al. Among authors: creevey cj. Front Microbiol. 2018 May 25;9:1095. doi: 10.3389/fmicb.2018.01095. eCollection 2018. Front Microbiol. 2018. PMID: 29887853 Free PMC article.

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