Käll L - Search Results

1

Growth of Cyanobacteria Is Constrained by the Abundance of Light and Carbon Assimilation Proteins.

Jahn M, Vialas V, Karlsen J, Maddalo G, Edfors F, Forsström B, Uhlén M, Käll L, Hudson EP. Jahn M, et al. Among authors: kall l. Cell Rep. 2018 Oct 9;25(2):478-486.e8. doi: 10.1016/j.celrep.2018.09.040. Cell Rep. 2018. PMID: 30304686 Free article.

2

The Association of Biomolecular Resource Facilities Proteome Informatics Research Group Study on Metaproteomics (iPRG-2020).

Jagtap PD, Hoopmann MR, Neely BA, Harvey A, Käll L, Perez-Riverol Y, Abajorga MK, Thomas JA, Weintraub ST, Palmblad M. Jagtap PD, et al. Among authors: kall l. J Biomol Tech. 2023 Aug 7;34(3):3fc1f5fe.a058bad4. doi: 10.7171/3fc1f5fe.a058bad4. eCollection 2023 Sep 30. J Biomol Tech. 2023. PMID: 37969874 Free PMC article.

3

Gene-specific correlation of RNA and protein levels in human cells and tissues.

Edfors F, Danielsson F, Hallström BM, Käll L, Lundberg E, Pontén F, Forsström B, Uhlén M. Edfors F, et al. Among authors: kall l. Mol Syst Biol. 2016 Oct 20;12(10):883. doi: 10.15252/msb.20167144. Mol Syst Biol. 2016. PMID: 27951527 Free PMC article.

4

A Protein Standard That Emulates Homology for the Characterization of Protein Inference Algorithms.

The M, Edfors F, Perez-Riverol Y, Payne SH, Hoopmann MR, Palmblad M, Forsström B, Käll L. The M, et al. Among authors: kall l. J Proteome Res. 2018 May 4;17(5):1879-1886. doi: 10.1021/acs.jproteome.7b00899. Epub 2018 Apr 16. J Proteome Res. 2018. PMID: 29631402 Free PMC article.

5

How to talk about protein-level false discovery rates in shotgun proteomics.

The M, Tasnim A, Käll L. The M, et al. Among authors: kall l. Proteomics. 2016 Sep;16(18):2461-9. doi: 10.1002/pmic.201500431. Proteomics. 2016. PMID: 27503675 Free PMC article.

6

Uncertainty estimation of predictions of peptides' chromatographic retention times in shotgun proteomics.

Maboudi Afkham H, Qiu X, The M, Käll L. Maboudi Afkham H, et al. Among authors: kall l. Bioinformatics. 2017 Feb 15;33(4):508-513. doi: 10.1093/bioinformatics/btw619. Bioinformatics. 2017. PMID: 27797755

7

Integrated Identification and Quantification Error Probabilities for Shotgun Proteomics.

The M, Käll L. The M, et al. Among authors: kall l. Mol Cell Proteomics. 2019 Mar;18(3):561-570. doi: 10.1074/mcp.RA118.001018. Epub 2018 Nov 27. Mol Cell Proteomics. 2019. PMID: 30482846 Free PMC article.

8

CoExpresso: assess the quantitative behavior of protein complexes in human cells.

Chalabi MH, Tsiamis V, Käll L, Vandin F, Schwämmle V. Chalabi MH, et al. Among authors: kall l. BMC Bioinformatics. 2019 Jan 9;20(1):17. doi: 10.1186/s12859-018-2573-8. BMC Bioinformatics. 2019. PMID: 30626316 Free PMC article.

9

Focus on the spectra that matter by clustering of quantification data in shotgun proteomics.

The M, Käll L. The M, et al. Among authors: kall l. Nat Commun. 2020 Jun 26;11(1):3234. doi: 10.1038/s41467-020-17037-3. Nat Commun. 2020. PMID: 32591519 Free PMC article.

10

Peptide retention time prediction.

Moruz L, Käll L. Moruz L, et al. Among authors: kall l. Mass Spectrom Rev. 2017 Sep;36(5):615-623. doi: 10.1002/mas.21488. Epub 2016 Jan 22. Mass Spectrom Rev. 2017. PMID: 26799864 Review.

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