Junge A - Search Results

1

STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets.

Szklarczyk D, Gable AL, Lyon D, Junge A, Wyder S, Huerta-Cepas J, Simonovic M, Doncheva NT, Morris JH, Bork P, Jensen LJ, Mering CV. Szklarczyk D, et al. Among authors: junge a. Nucleic Acids Res. 2019 Jan 8;47(D1):D607-D613. doi: 10.1093/nar/gky1131. Nucleic Acids Res. 2019. PMID: 30476243 Free PMC article.

2

RAIN: RNA-protein Association and Interaction Networks.

Junge A, Refsgaard JC, Garde C, Pan X, Santos A, Alkan F, Anthon C, von Mering C, Workman CT, Jensen LJ, Gorodkin J. Junge A, et al. Database (Oxford). 2017 Jan 10;2017:baw167. doi: 10.1093/database/baw167. Print 2017. Database (Oxford). 2017. PMID: 28077569 Free PMC article.

3

CoCoScore: context-aware co-occurrence scoring for text mining applications using distant supervision.

Junge A, Jensen LJ. Junge A, et al. Bioinformatics. 2020 Jan 1;36(1):264-271. doi: 10.1093/bioinformatics/btz490. Bioinformatics. 2020. PMID: 31199464 Free PMC article.

4

Diseases 2.0: a weekly updated database of disease-gene associations from text mining and data integration.

Grissa D, Junge A, Oprea TI, Jensen LJ. Grissa D, et al. Among authors: junge a. Database (Oxford). 2022 Mar 28;2022:baac019. doi: 10.1093/database/baac019. Database (Oxford). 2022. PMID: 35348648 Free PMC article.

5

KeyPathwayMiner 4.0: condition-specific pathway analysis by combining multiple omics studies and networks with Cytoscape.

Alcaraz N, Pauling J, Batra R, Barbosa E, Junge A, Christensen AG, Azevedo V, Ditzel HJ, Baumbach J. Alcaraz N, et al. Among authors: junge a. BMC Syst Biol. 2014 Aug 19;8:99. doi: 10.1186/s12918-014-0099-x. BMC Syst Biol. 2014. PMID: 25134827 Free PMC article.

6

Assessing the miRNA sponge potential of RUNX1T1 in t(8;21) acute myeloid leukemia.

Junge A, Zandi R, Havgaard JH, Gorodkin J, Cowland JB. Junge A, et al. Gene. 2017 Jun 5;615:35-40. doi: 10.1016/j.gene.2017.03.015. Epub 2017 Mar 16. Gene. 2017. PMID: 28322996

7

RNAscClust: clustering RNA sequences using structure conservation and graph based motifs.

Miladi M, Junge A, Costa F, Seemann SE, Havgaard JH, Gorodkin J, Backofen R. Miladi M, et al. Among authors: junge a. Bioinformatics. 2017 Jul 15;33(14):2089-2096. doi: 10.1093/bioinformatics/btx114. Bioinformatics. 2017. PMID: 28334186 Free PMC article.

8

Clusters of mammalian conserved RNA structures in UTRs associate with RBP binding sites.

Gadekar VP, Munk AW, Miladi M, Junge A, Backofen R, Seemann SE, Gorodkin J. Gadekar VP, et al. Among authors: junge a. NAR Genom Bioinform. 2024 Aug 9;6(3):lqae089. doi: 10.1093/nargab/lqae089. eCollection 2024 Sep. NAR Genom Bioinform. 2024. PMID: 39131818 Free PMC article.

9

Highlights from the tenth ISCB Student Council Symposium 2014.

Rahman F, Wilkins K, Jacobsen A, Junge A, Vicedo E, DeBlasio D, Jigisha A, Di Domenico T. Rahman F, et al. Among authors: junge a. BMC Bioinformatics. 2015;16 Suppl 2(Suppl 2):A1-10. doi: 10.1186/1471-2105-16-s2-a1. Epub 2015 Jan 28. BMC Bioinformatics. 2015. PMID: 25708534 Free PMC article.

10

On the hunt for the alternate host of Hemileia vastatrix.

Koutouleas A, Jørgen Lyngs Jørgensen H, Jensen B, Lillesø JB, Junge A, Ræbild A. Koutouleas A, et al. Among authors: junge a. Ecol Evol. 2019 Nov 23;9(23):13619-13631. doi: 10.1002/ece3.5755. eCollection 2019 Dec. Ecol Evol. 2019. PMID: 31871671 Free PMC article.

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