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Page 1
Capturing sequence diversity in metagenomes with comprehensive and scalable probe design.
Metsky HC, Siddle KJ, Gladden-Young A, Qu J, Yang DK, Brehio P, Goldfarb A, Piantadosi A, Wohl S, Carter A, Lin AE, Barnes KG, Tully DC, Corleis B, Hennigan S, Barbosa-Lima G, Vieira YR, Paul LM, Tan AL, Garcia KF, Parham LA, Odia I, Eromon P, Folarin OA, Goba A; Viral Hemorrhagic Fever Consortium; Simon-Lorière E, Hensley L, Balmaseda A, Harris E, Kwon DS, Allen TM, Runstadler JA, Smole S, Bozza FA, Souza TML, Isern S, Michael SF, Lorenzana I, Gehrke L, Bosch I, Ebel G, Grant DS, Happi CT, Park DJ, Gnirke A, Sabeti PC, Matranga CB. Metsky HC, et al. Among authors: garcia kf. Nat Biotechnol. 2019 Feb;37(2):160-168. doi: 10.1038/s41587-018-0006-x. Epub 2019 Feb 4. Nat Biotechnol. 2019. PMID: 30718881 Free PMC article.
Zika virus evolution and spread in the Americas.
Metsky HC, Matranga CB, Wohl S, Schaffner SF, Freije CA, Winnicki SM, West K, Qu J, Baniecki ML, Gladden-Young A, Lin AE, Tomkins-Tinch CH, Ye SH, Park DJ, Luo CY, Barnes KG, Shah RR, Chak B, Barbosa-Lima G, Delatorre E, Vieira YR, Paul LM, Tan AL, Barcellona CM, Porcelli MC, Vasquez C, Cannons AC, Cone MR, Hogan KN, Kopp EW, Anzinger JJ, Garcia KF, Parham LA, Ramírez RMG, Montoya MCM, Rojas DP, Brown CM, Hennigan S, Sabina B, Scotland S, Gangavarapu K, Grubaugh ND, Oliveira G, Robles-Sikisaka R, Rambaut A, Gehrke L, Smole S, Halloran ME, Villar L, Mattar S, Lorenzana I, Cerbino-Neto J, Valim C, Degrave W, Bozza PT, Gnirke A, Andersen KG, Isern S, Michael SF, Bozza FA, Souza TML, Bosch I, Yozwiak NL, MacInnis BL, Sabeti PC. Metsky HC, et al. Among authors: garcia kf. Nature. 2017 Jun 15;546(7658):411-415. doi: 10.1038/nature22402. Epub 2017 May 24. Nature. 2017. PMID: 28538734 Free PMC article.
Field-deployable viral diagnostics using CRISPR-Cas13.
Myhrvold C, Freije CA, Gootenberg JS, Abudayyeh OO, Metsky HC, Durbin AF, Kellner MJ, Tan AL, Paul LM, Parham LA, Garcia KF, Barnes KG, Chak B, Mondini A, Nogueira ML, Isern S, Michael SF, Lorenzana I, Yozwiak NL, MacInnis BL, Bosch I, Gehrke L, Zhang F, Sabeti PC. Myhrvold C, et al. Among authors: garcia kf. Science. 2018 Apr 27;360(6387):444-448. doi: 10.1126/science.aas8836. Science. 2018. PMID: 29700266 Free PMC article.
Development and Validation of a Rapid Lateral Flow E1/E2-Antigen Test and ELISA in Patients Infected with Emerging Asian Strain of Chikungunya Virus in the Americas.
Reddy A, Bosch I, Salcedo N, Herrera BB, de Puig H, Narváez CF, Caicedo-Borrero DM, Lorenzana I, Parham L, García K, Mercado M, Turca AMR, Villar-Centeno LA, Gélvez-Ramírez M, Ríos NAG, Hiley M, García D, Diamond MS, Gehrke L. Reddy A, et al. Viruses. 2020 Sep 1;12(9):971. doi: 10.3390/v12090971. Viruses. 2020. PMID: 32882998 Free PMC article.
Evaluation of ELISA-Based Multiplex Peptides for the Detection of Human Serum Antibodies Induced by Zika Virus Infection across Various Countries.
Martinez Viedma MDP, Panossian S, Gifford K, García K, Figueroa I, Parham L, de Moraes L, Nunes Gomes L, García-Salum T, Perret C, Weiskopf D, Tan GS, Augusto Silva A, Boaventura V, Ruiz-Palacios GM, Sette A, De Silva AD, Medina RA, Lorenzana I, Akrami KM, Khouri R, Olson D, Pickett BE. Martinez Viedma MDP, et al. Viruses. 2021 Jul 8;13(7):1319. doi: 10.3390/v13071319. Viruses. 2021. PMID: 34372525 Free PMC article.
Microcephaly Outcomes among Zika Virus-Infected Pregnant Women in Honduras.
Alger J, Buekens P, Cafferata ML, Alvarez Z, Berrueta M, Bock H, Bustillo C, Calderón A, Callejas A, Castillo M, Ciganda A, Fúnes J, García J, García K, Gibbons L, Gilboa SM, Harville EW, Hernández G, López R, López W, Lorenzana I, Tulio Luque M, Maldonado C, Moore CA, Ochoa C, Parham L, Pastrana K, Rico F, Rodríguez H, Stella C, Valencia D, Varela D, Wesson DM, Zúniga C, Tong VT. Alger J, et al. Am J Trop Med Hyg. 2021 Mar 15;104(5):1737-1740. doi: 10.4269/ajtmh.20-1483. Am J Trop Med Hyg. 2021. PMID: 33724927 Free PMC article.
Neurodevelopmental assessment of normocephalic children born to Zika virus exposed and unexposed pregnant people.
Alger J, Cafferata ML, López R, Wiggins LD, Callejas A, Castillo M, Fúnes J, Rico F, Valencia D, Varela D, Alvarez Z, Berrueta M, Bock H, Bustillo C, Calderón A, Ciganda A, García-Aguilar J, García K, Gibbons L, Gilboa SM, Harville EW, Hernández G, López W, Lorenzana I, Luque MT, Maldonado C, Moore C, Ochoa C, Parham L, Pastrana K, Paternina-Caicedo A, Rodríguez H, Stella C, Tannis AF, Wesson DM, Zúniga C, Tong VT, Buekens P. Alger J, et al. Pediatr Res. 2024 Jan;95(2):566-572. doi: 10.1038/s41390-023-02951-1. Epub 2023 Dec 6. Pediatr Res. 2024. PMID: 38057577