van Oudenaarden A - Search Results

1

Combined quantification of intracellular (phospho-)proteins and transcriptomics from fixed single cells.

Gerlach JP, van Buggenum JAG, Tanis SEJ, Hogeweg M, Heuts BMH, Muraro MJ, Elze L, Rivello F, Rakszewska A, van Oudenaarden A, Huck WTS, Stunnenberg HG, Mulder KW. Gerlach JP, et al. Among authors: van buggenum jag, van oudenaarden a. Sci Rep. 2019 Feb 6;9(1):1469. doi: 10.1038/s41598-018-37977-7. Sci Rep. 2019. PMID: 30728416 Free PMC article.

2

Validation of noise models for single-cell transcriptomics.

Grün D, Kester L, van Oudenaarden A. Grün D, et al. Among authors: van oudenaarden a. Nat Methods. 2014 Jun;11(6):637-40. doi: 10.1038/nmeth.2930. Epub 2014 Apr 20. Nat Methods. 2014. PMID: 24747814

3

Spatially resolved transcriptomics and beyond.

Crosetto N, Bienko M, van Oudenaarden A. Crosetto N, et al. Among authors: van oudenaarden a. Nat Rev Genet. 2015 Jan;16(1):57-66. doi: 10.1038/nrg3832. Epub 2014 Dec 2. Nat Rev Genet. 2015. PMID: 25446315 Review.

4

Single-cell transcriptomics enters the age of mass production.

Junker JP, van Oudenaarden A. Junker JP, et al. Among authors: van oudenaarden a. Mol Cell. 2015 May 21;58(4):563-4. doi: 10.1016/j.molcel.2015.05.019. Mol Cell. 2015. PMID: 26000840 Free article.

5

Design and Analysis of Single-Cell Sequencing Experiments.

Grün D, van Oudenaarden A. Grün D, et al. Among authors: van oudenaarden a. Cell. 2015 Nov 5;163(4):799-810. doi: 10.1016/j.cell.2015.10.039. Cell. 2015. PMID: 26544934 Free article. Review.

6

De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.

Grün D, Muraro MJ, Boisset JC, Wiebrands K, Lyubimova A, Dharmadhikari G, van den Born M, van Es J, Jansen E, Clevers H, de Koning EJP, van Oudenaarden A. Grün D, et al. Among authors: van den born m, van oudenaarden a, van es j. Cell Stem Cell. 2016 Aug 4;19(2):266-277. doi: 10.1016/j.stem.2016.05.010. Epub 2016 Jun 23. Cell Stem Cell. 2016. PMID: 27345837 Free PMC article.

7

A Single-Cell Transcriptome Atlas of the Human Pancreas.

Muraro MJ, Dharmadhikari G, Grün D, Groen N, Dielen T, Jansen E, van Gurp L, Engelse MA, Carlotti F, de Koning EJ, van Oudenaarden A. Muraro MJ, et al. Among authors: van oudenaarden a, van gurp l. Cell Syst. 2016 Oct 26;3(4):385-394.e3. doi: 10.1016/j.cels.2016.09.002. Epub 2016 Sep 29. Cell Syst. 2016. PMID: 27693023 Free PMC article.

8

Identity and dynamics of mammary stem cells during branching morphogenesis.

Scheele CL, Hannezo E, Muraro MJ, Zomer A, Langedijk NS, van Oudenaarden A, Simons BD, van Rheenen J. Scheele CL, et al. Among authors: van oudenaarden a, van rheenen j. Nature. 2017 Feb 16;542(7641):313-317. doi: 10.1038/nature21046. Epub 2017 Jan 30. Nature. 2017. PMID: 28135720 Free PMC article.

9

Circadian networks in human embryonic stem cell-derived cardiomyocytes.

Dierickx P, Vermunt MW, Muraro MJ, Creyghton MP, Doevendans PA, van Oudenaarden A, Geijsen N, Van Laake LW. Dierickx P, et al. Among authors: van oudenaarden a, van laake lw. EMBO Rep. 2017 Jul;18(7):1199-1212. doi: 10.15252/embr.201743897. Epub 2017 May 23. EMBO Rep. 2017. PMID: 28536247 Free PMC article.

10

Dynamics of lineage commitment revealed by single-cell transcriptomics of differentiating embryonic stem cells.

Semrau S, Goldmann JE, Soumillon M, Mikkelsen TS, Jaenisch R, van Oudenaarden A. Semrau S, et al. Among authors: van oudenaarden a. Nat Commun. 2017 Oct 23;8(1):1096. doi: 10.1038/s41467-017-01076-4. Nat Commun. 2017. PMID: 29061959 Free PMC article.

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