Koonin EV - Search Results

1

Reply to 'Evolutionary placement of Methanonatronarchaeia'.

Sorokin DY, Makarova KS, Abbas B, Ferrer M, Golyshin PN, Galinski EA, Ciorda S, Mena MC, Merkel AY, Wolf YI, van Loosdrecht MCM, Koonin EV. Sorokin DY, et al. Among authors: koonin ev. Nat Microbiol. 2019 Apr;4(4):560-561. doi: 10.1038/s41564-019-0358-0. Nat Microbiol. 2019. PMID: 30804545 No abstract available.

2

A new superfamily of putative NTP-binding domains encoded by genomes of small DNA and RNA viruses.

Gorbalenya AE, Koonin EV, Wolf YI. Gorbalenya AE, et al. Among authors: koonin ev. FEBS Lett. 1990 Mar 12;262(1):145-8. doi: 10.1016/0014-5793(90)80175-i. FEBS Lett. 1990. PMID: 2156730 Free article.

3

Distribution of protein folds in the three superkingdoms of life.

Wolf YI, Brenner SE, Bash PA, Koonin EV. Wolf YI, et al. Among authors: koonin ev. Genome Res. 1999 Jan;9(1):17-26. Genome Res. 1999. PMID: 9927481 Free article.

4

Rickettsiae and Chlamydiae: evidence of horizontal gene transfer and gene exchange.

Wolf YI, Aravind L, Koonin EV. Wolf YI, et al. Among authors: koonin ev. Trends Genet. 1999 May;15(5):173-5. doi: 10.1016/s0168-9525(99)01704-7. Trends Genet. 1999. PMID: 10322483 Review. No abstract available.

5

Comparative genomics of the Archaea (Euryarchaeota): evolution of conserved protein families, the stable core, and the variable shell.

Makarova KS, Aravind L, Galperin MY, Grishin NV, Tatusov RL, Wolf YI, Koonin EV. Makarova KS, et al. Among authors: koonin ev. Genome Res. 1999 Jul;9(7):608-28. Genome Res. 1999. PMID: 10413400 Free article.

6

Evolution of aminoacyl-tRNA synthetases--analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events.

Wolf YI, Aravind L, Grishin NV, Koonin EV. Wolf YI, et al. Among authors: koonin ev. Genome Res. 1999 Aug;9(8):689-710. Genome Res. 1999. PMID: 10447505 Free article.

7

A superfamily of archaeal, bacterial, and eukaryotic proteins homologous to animal transglutaminases.

Makarova KS, Aravind L, Koonin EV. Makarova KS, et al. Among authors: koonin ev. Protein Sci. 1999 Aug;8(8):1714-9. doi: 10.1110/ps.8.8.1714. Protein Sci. 1999. PMID: 10452618 Free PMC article.

8

A novel superfamily of predicted cysteine proteases from eukaryotes, viruses and Chlamydia pneumoniae.

Makarova KS, Aravind L, Koonin EV. Makarova KS, et al. Among authors: koonin ev. Trends Biochem Sci. 2000 Feb;25(2):50-2. doi: 10.1016/s0968-0004(99)01530-3. Trends Biochem Sci. 2000. PMID: 10664582 No abstract available.

9

IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices.

Schäffer AA, Wolf YI, Ponting CP, Koonin EV, Aravind L, Altschul SF. Schäffer AA, et al. Among authors: koonin ev. Bioinformatics. 1999 Dec;15(12):1000-11. doi: 10.1093/bioinformatics/15.12.1000. Bioinformatics. 1999. PMID: 10745990

10

Protein fold recognition using sequence profiles and its application in structural genomics.

Koonin EV, Wolf YI, Aravind L. Koonin EV, et al. Adv Protein Chem. 2000;54:245-75. doi: 10.1016/s0065-3233(00)54008-x. Adv Protein Chem. 2000. PMID: 10829230 Review. No abstract available.

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