Reifman J - Search Results

1

Network Modeling of Liver Metabolism to Predict Plasma Metabolite Changes During Short-Term Fasting in the Laboratory Rat.

Vinnakota KC, Pannala VR, Wall ML, Rahim M, Estes SK, Trenary I, O'Brien TP, Printz RL, Reifman J, Shiota M, Young JD, Wallqvist A. Vinnakota KC, et al. Among authors: reifman j. Front Physiol. 2019 Mar 1;10:161. doi: 10.3389/fphys.2019.00161. eCollection 2019. Front Physiol. 2019. PMID: 30881311 Free PMC article.

2

Evidence of probabilistic behaviour in protein interaction networks.

Ivanic J, Wallqvist A, Reifman J. Ivanic J, et al. Among authors: reifman j. BMC Syst Biol. 2008 Jan 31;2:11. doi: 10.1186/1752-0509-2-11. BMC Syst Biol. 2008. PMID: 18237403 Free PMC article.

3

DOVIS: an implementation for high-throughput virtual screening using AutoDock.

Zhang S, Kumar K, Jiang X, Wallqvist A, Reifman J. Zhang S, et al. Among authors: reifman j. BMC Bioinformatics. 2008 Feb 27;9:126. doi: 10.1186/1471-2105-9-126. BMC Bioinformatics. 2008. PMID: 18304355 Free PMC article.

4

Probing the extent of randomness in protein interaction networks.

Ivanic J, Wallqvist A, Reifman J. Ivanic J, et al. Among authors: reifman j. PLoS Comput Biol. 2008 Jul 11;4(7):e1000114. doi: 10.1371/journal.pcbi.1000114. PLoS Comput Biol. 2008. PMID: 18769589 Free PMC article.

5

DOVIS 2.0: an efficient and easy to use parallel virtual screening tool based on AutoDock 4.0.

Jiang X, Kumar K, Hu X, Wallqvist A, Reifman J. Jiang X, et al. Among authors: reifman j. Chem Cent J. 2008 Sep 8;2:18. doi: 10.1186/1752-153X-2-18. Chem Cent J. 2008. PMID: 18778471 Free PMC article.

6

Influence of protein abundance on high-throughput protein-protein interaction detection.

Ivanic J, Yu X, Wallqvist A, Reifman J. Ivanic J, et al. Among authors: reifman j. PLoS One. 2009 Jun 5;4(6):e5815. doi: 10.1371/journal.pone.0005815. PLoS One. 2009. PMID: 19503833 Free PMC article.

7

PSPP: a protein structure prediction pipeline for computing clusters.

Lee MS, Bondugula R, Desai V, Zavaljevski N, Yeh IC, Wallqvist A, Reifman J. Lee MS, et al. Among authors: reifman j. PLoS One. 2009 Jul 16;4(7):e6254. doi: 10.1371/journal.pone.0006254. PLoS One. 2009. PMID: 19606223 Free PMC article.

8

A systems biology framework for modeling metabolic enzyme inhibition of Mycobacterium tuberculosis.

Fang X, Wallqvist A, Reifman J. Fang X, et al. Among authors: reifman j. BMC Syst Biol. 2009 Sep 15;3:92. doi: 10.1186/1752-0509-3-92. BMC Syst Biol. 2009. PMID: 19754970 Free PMC article.

9

A novel scoring approach for protein co-purification data reveals high interaction specificity.

Yu X, Ivanic J, Wallqvist A, Reifman J. Yu X, et al. Among authors: reifman j. PLoS Comput Biol. 2009 Sep;5(9):e1000515. doi: 10.1371/journal.pcbi.1000515. Epub 2009 Sep 25. PLoS Comput Biol. 2009. PMID: 19779545 Free PMC article.

10

Development and analysis of an in vivo-compatible metabolic network of Mycobacterium tuberculosis.

Fang X, Wallqvist A, Reifman J. Fang X, et al. Among authors: reifman j. BMC Syst Biol. 2010 Nov 23;4:160. doi: 10.1186/1752-0509-4-160. BMC Syst Biol. 2010. PMID: 21092312 Free PMC article.

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