Kavakli IH - Search Results

1

Cryptochrome deletion in p53 mutant mice enhances apoptotic and anti-tumorigenic responses to UV damage at the transcriptome level.

Cavga AD, Tardu M, Korkmaz T, Keskin O, Ozturk N, Gursoy A, Kavakli IH. Cavga AD, et al. Among authors: kavakli ih. Funct Integr Genomics. 2019 Sep;19(5):729-742. doi: 10.1007/s10142-019-00680-5. Epub 2019 May 1. Funct Integr Genomics. 2019. PMID: 31044344

2

Insights into subunit interactions in the heterotetrameric structure of potato ADP-glucose pyrophosphorylase.

Tuncel A, Kavakli IH, Keskin O. Tuncel A, et al. Among authors: kavakli ih. Biophys J. 2008 Oct;95(8):3628-39. doi: 10.1529/biophysj.107.123042. Epub 2008 Jul 18. Biophys J. 2008. PMID: 18641076 Free PMC article.

3

Investigation of the interaction between the large and small subunits of potato ADP-glucose pyrophosphorylase.

Baris I, Tuncel A, Ozber N, Keskin O, Kavakli IH. Baris I, et al. Among authors: kavakli ih. PLoS Comput Biol. 2009 Oct;5(10):e1000546. doi: 10.1371/journal.pcbi.1000546. Epub 2009 Oct 30. PLoS Comput Biol. 2009. PMID: 19876371 Free PMC article.

4

Reduced Glucose Sensation Can Increase the Fitness of Saccharomyces cerevisiae Lacking Mitochondrial DNA.

Akdoğan E, Tardu M, Garipler G, Baytek G, Kavakli İH, Dunn CD. Akdoğan E, et al. Among authors: kavakli ih. PLoS One. 2016 Jan 11;11(1):e0146511. doi: 10.1371/journal.pone.0146511. eCollection 2016. PLoS One. 2016. PMID: 26751567 Free PMC article.

5

RNA-seq analysis of the transcriptional response to blue and red light in the extremophilic red alga, Cyanidioschyzon merolae.

Tardu M, Dikbas UM, Baris I, Kavakli IH. Tardu M, et al. Among authors: kavakli ih. Funct Integr Genomics. 2016 Nov;16(6):657-669. doi: 10.1007/s10142-016-0521-0. Epub 2016 Sep 10. Funct Integr Genomics. 2016. PMID: 27614431

6

The Photolyase/Cryptochrome Family of Proteins as DNA Repair Enzymes and Transcriptional Repressors.

Kavakli IH, Baris I, Tardu M, Gül Ş, Öner H, Çal S, Bulut S, Yarparvar D, Berkel Ç, Ustaoğlu P, Aydın C. Kavakli IH, et al. Photochem Photobiol. 2017 Jan;93(1):93-103. doi: 10.1111/php.12669. Epub 2017 Jan 9. Photochem Photobiol. 2017. PMID: 28067410 Review.

7

MerR and ChrR mediate blue light induced photo-oxidative stress response at the transcriptional level in Vibrio cholerae.

Tardu M, Bulut S, Kavakli IH. Tardu M, et al. Among authors: kavakli ih. Sci Rep. 2017 Jan 18;7:40817. doi: 10.1038/srep40817. Sci Rep. 2017. PMID: 28098242 Free PMC article.

8

DNA repair by photolyases.

Kavakli IH, Ozturk N, Gul S. Kavakli IH, et al. Adv Protein Chem Struct Biol. 2019;115:1-19. doi: 10.1016/bs.apcsb.2018.10.003. Epub 2018 Dec 20. Adv Protein Chem Struct Biol. 2019. PMID: 30798929 Review.

9

Comparative RNA-seq analysis of the drought-sensitive lentil (Lens culinaris) root and leaf under short- and long-term water deficits.

Morgil H, Tardu M, Cevahir G, Kavakli İH. Morgil H, et al. Among authors: kavakli ih. Funct Integr Genomics. 2019 Sep;19(5):715-727. doi: 10.1007/s10142-019-00675-2. Epub 2019 Apr 18. Funct Integr Genomics. 2019. PMID: 31001704

10

Identification and Characterization of a New Class of (6-4) Photolyase from Vibrio cholerae.

Dikbas UM, Tardu M, Canturk A, Gul S, Ozcelik G, Baris I, Ozturk N, Kavakli IH. Dikbas UM, et al. Among authors: kavakli ih. Biochemistry. 2019 Oct 29;58(43):4352-4360. doi: 10.1021/acs.biochem.9b00766. Epub 2019 Oct 15. Biochemistry. 2019. PMID: 31578858

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