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Epidemiological links between tuberculosis cases identified twice as efficiently by whole genome sequencing than conventional molecular typing: A population-based study.
Jajou R, de Neeling A, van Hunen R, de Vries G, Schimmel H, Mulder A, Anthony R, van der Hoek W, van Soolingen D. Jajou R, et al. Among authors: de neeling a. PLoS One. 2018 Apr 4;13(4):e0195413. doi: 10.1371/journal.pone.0195413. eCollection 2018. PLoS One. 2018. PMID: 29617456 Free PMC article.
Prevalence and Characterization of Heterogeneous Variable-Number Tandem-Repeat Clusters Comprising Drug-Susceptible and/or Variable Resistant Mycobacterium tuberculosis Complex Isolates in the Netherlands from 2004 to 2016.
Roof I, Jajou R, Kamst M, Mulder A, de Neeling A, van Hunen R, van der Hoek W, van Soolingen D. Roof I, et al. Among authors: de neeling a. J Clin Microbiol. 2018 Oct 25;56(11):e00887-18. doi: 10.1128/JCM.00887-18. Print 2018 Nov. J Clin Microbiol. 2018. PMID: 30158196 Free PMC article.
Towards standardisation: comparison of five whole genome sequencing (WGS) analysis pipelines for detection of epidemiologically linked tuberculosis cases.
Jajou R, Kohl TA, Walker T, Norman A, Cirillo DM, Tagliani E, Niemann S, de Neeling A, Lillebaek T, Anthony RM, van Soolingen D. Jajou R, et al. Among authors: de neeling a. Euro Surveill. 2019 Dec;24(50):1900130. doi: 10.2807/1560-7917.ES.2019.24.50.1900130. Euro Surveill. 2019. PMID: 31847944 Free PMC article.
A Predominant Variable-Number Tandem-Repeat Cluster of Mycobacterium tuberculosis Isolates among Asylum Seekers in the Netherlands and Denmark, Deciphered by Whole-Genome Sequencing.
Jajou R, de Neeling A, Rasmussen EM, Norman A, Mulder A, van Hunen R, de Vries G, Haddad W, Anthony R, Lillebaek T, van der Hoek W, van Soolingen D. Jajou R, et al. Among authors: de neeling a. J Clin Microbiol. 2018 Jan 24;56(2):e01100-17. doi: 10.1128/JCM.01100-17. Print 2018 Feb. J Clin Microbiol. 2018. PMID: 29167288 Free PMC article.
Use of a whole genome sequencing-based approach for Mycobacterium tuberculosis surveillance in Europe in 2017-2019: an ECDC pilot study.
Tagliani E, Anthony R, Kohl TA, de Neeling A, Nikolayevskyy V, Ködmön C, Maurer FP, Niemann S, van Soolingen D, van der Werf MJ, Cirillo DM; ECDC molecular surveillance project participants. Tagliani E, et al. Among authors: de neeling a. Eur Respir J. 2021 Jan 5;57(1):2002272. doi: 10.1183/13993003.02272-2020. Print 2021 Jan. Eur Respir J. 2021. PMID: 32732329 Free PMC article.
SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex.
Lipworth S, Jajou R, de Neeling A, Bradley P, van der Hoek W, Maphalala G, Bonnet M, Sanchez-Padilla E, Diel R, Niemann S, Iqbal Z, Smith G, Peto T, Crook D, Walker T, van Soolingen D. Lipworth S, et al. Among authors: de neeling a. Emerg Infect Dis. 2019 Mar;25(3):482-488. doi: 10.3201/eid2503.180894. Emerg Infect Dis. 2019. PMID: 30789126 Free PMC article.
Correction: Epidemiological links between tuberculosis cases identified twice as efficiently by whole genome sequencing than conventional molecular typing: A population-based study.
Jajou R, de Neeling A, van Hunen R, de Vries G, Schimmel H, Mulder A, Anthony R, van der Hoek W, van Soolingen D. Jajou R, et al. Among authors: de neeling a. PLoS One. 2018 May 14;13(5):e0197556. doi: 10.1371/journal.pone.0197556. eCollection 2018. PLoS One. 2018. PMID: 29758083 Free PMC article.
New statistical technique for analyzing MIC-based susceptibility data.
van de Kassteele J, van Santen-Verheuvel MG, Koedijk FD, van Dam AP, van der Sande MA, de Neeling AJ. van de Kassteele J, et al. Among authors: de neeling aj. Antimicrob Agents Chemother. 2012 Mar;56(3):1557-63. doi: 10.1128/AAC.05777-11. Epub 2012 Jan 9. Antimicrob Agents Chemother. 2012. PMID: 22232288 Free PMC article.
87 results