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Page 1
Viral evolution and escape during acute HIV-1 infection.
Boutwell CL, Rolland MM, Herbeck JT, Mullins JI, Allen TM. Boutwell CL, et al. J Infect Dis. 2010 Oct 15;202 Suppl 2(Suppl 2):S309-14. doi: 10.1086/655653. J Infect Dis. 2010. PMID: 20846038 Free PMC article. Review.
Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection.
Henn MR, Boutwell CL, Charlebois P, Lennon NJ, Power KA, Macalalad AR, Berlin AM, Malboeuf CM, Ryan EM, Gnerre S, Zody MC, Erlich RL, Green LM, Berical A, Wang Y, Casali M, Streeck H, Bloom AK, Dudek T, Tully D, Newman R, Axten KL, Gladden AD, Battis L, Kemper M, Zeng Q, Shea TP, Gujja S, Zedlack C, Gasser O, Brander C, Hess C, Günthard HF, Brumme ZL, Brumme CJ, Bazner S, Rychert J, Tinsley JP, Mayer KH, Rosenberg E, Pereyra F, Levin JZ, Young SK, Jessen H, Altfeld M, Birren BW, Walker BD, Allen TM. Henn MR, et al. Among authors: boutwell cl. PLoS Pathog. 2012;8(3):e1002529. doi: 10.1371/journal.ppat.1002529. Epub 2012 Mar 8. PLoS Pathog. 2012. PMID: 22412369 Free PMC article.
Highly sensitive and specific detection of rare variants in mixed viral populations from massively parallel sequence data.
Macalalad AR, Zody MC, Charlebois P, Lennon NJ, Newman RM, Malboeuf CM, Ryan EM, Boutwell CL, Power KA, Brackney DE, Pesko KN, Levin JZ, Ebel GD, Allen TM, Birren BW, Henn MR. Macalalad AR, et al. Among authors: boutwell cl. PLoS Comput Biol. 2012;8(3):e1002417. doi: 10.1371/journal.pcbi.1002417. Epub 2012 Mar 15. PLoS Comput Biol. 2012. PMID: 22438797 Free PMC article.
Rapid evolution of HIV-1 to functional CD8⁺ T cell responses in humanized BLT mice.
Dudek TE, No DC, Seung E, Vrbanac VD, Fadda L, Bhoumik P, Boutwell CL, Power KA, Gladden AD, Battis L, Mellors EF, Tivey TR, Gao X, Altfeld M, Luster AD, Tager AM, Allen TM. Dudek TE, et al. Among authors: boutwell cl. Sci Transl Med. 2012 Jul 18;4(143):143ra98. doi: 10.1126/scitranslmed.3003984. Sci Transl Med. 2012. PMID: 22814851 Free PMC article.
Efficient ablation of genes in human hematopoietic stem and effector cells using CRISPR/Cas9.
Mandal PK, Ferreira LM, Collins R, Meissner TB, Boutwell CL, Friesen M, Vrbanac V, Garrison BS, Stortchevoi A, Bryder D, Musunuru K, Brand H, Tager AM, Allen TM, Talkowski ME, Rossi DJ, Cowan CA. Mandal PK, et al. Among authors: boutwell cl. Cell Stem Cell. 2014 Nov 6;15(5):643-52. doi: 10.1016/j.stem.2014.10.004. Epub 2014 Nov 6. Cell Stem Cell. 2014. PMID: 25517468 Free PMC article.
BLT humanized mice as a small animal model of HIV infection.
Karpel ME, Boutwell CL, Allen TM. Karpel ME, et al. Among authors: boutwell cl. Curr Opin Virol. 2015 Aug;13:75-80. doi: 10.1016/j.coviro.2015.05.002. Epub 2015 Jun 12. Curr Opin Virol. 2015. PMID: 26083316 Free PMC article. Review.
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