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Profiling the long noncoding RNA interaction network in the regulatory elements of target genes by chromatin in situ reverse transcription sequencing.
Zhang S, Wang Y, Jia L, Wen X, Du Z, Wang C, Hao Y, Yu D, Zhou L, Chen N, Chen J, Chen H, Zhang H, Celik I, Gülsoy G, Luo J, Qin B, Cui X, Liu Z, Zhang S, Esteban MA, Ay F, Xu W, Chen R, Li W, Hoffman AR, Hu JF, Cui J. Zhang S, et al. Among authors: wang y, wang c. Genome Res. 2019 Sep;29(9):1521-1532. doi: 10.1101/gr.244996.118. Epub 2019 Jul 17. Genome Res. 2019. PMID: 31315906 Free PMC article.
Oplr16 serves as a novel chromatin factor to control stem cell fate by modulating pluripotency-specific chromosomal looping and TET2-mediated DNA demethylation.
Jia L, Wang Y, Wang C, Du Z, Zhang S, Wen X, Zhou L, Li H, Chen H, Li D, Zhang S, Li W, Xu W, Hoffman AR, Cui J, Hu JF. Jia L, et al. Among authors: wang y, wang c. Nucleic Acids Res. 2020 Apr 17;48(7):3935-3948. doi: 10.1093/nar/gkaa097. Nucleic Acids Res. 2020. PMID: 32055844 Free PMC article.
Chromatin lncRNA Platr10 controls stem cell pluripotency by coordinating an intrachromosomal regulatory network.
Du Z, Wen X, Wang Y, Jia L, Zhang S, Liu Y, Zhou L, Li H, Yang W, Wang C, Chen J, Hao Y, Salgado Figueroa D, Chen H, Li D, Chen N, Celik I, Zhu Y, Yan Z, Fu C, Liu S, Jiao B, Wang Z, Zhang H, Gülsoy G, Luo J, Qin B, Gao S, Kapranov P, Esteban MA, Zhang S, Li W, Ay F, Chen R, Hoffman AR, Cui J, Hu JF. Du Z, et al. Among authors: wang z, wang y, wang c. Genome Biol. 2021 Aug 19;22(1):233. doi: 10.1186/s13059-021-02444-6. Genome Biol. 2021. PMID: 34412677 Free PMC article.
Author Correction: Chromatin lncRNA Platr10 controls stem cell pluripotency by coordinating an intrachromosomal regulatory network.
Du Z, Wen X, Wang Y, Jia L, Zhang S, Liu Y, Zhou L, Li H, Yang W, Wang C, Chen J, Hao Y, Salgado Figueroa D, Chen H, Li D, Chen N, Celik I, Zhu Y, Yan Z, Fu C, Liu S, Jiao B, Wang Z, Zhang H, Gülsoy G, Luo J, Qin B, Gao S, Kapranov P, Esteban MA, Zhang S, Li W, Ay F, Chen R, Hoffman AR, Cui J, Hu JF. Du Z, et al. Among authors: wang z, wang y, wang c. Genome Biol. 2021 Sep 20;22(1):272. doi: 10.1186/s13059-021-02487-9. Genome Biol. 2021. PMID: 34544465 Free PMC article. No abstract available.
LncRNA Osilr9 coordinates promoter DNA demethylation and the intrachromosomal loop structure required for maintaining stem cell pluripotency.
Zhu Y, Yan Z, Fu C, Wen X, Jia L, Zhou L, Du Z, Wang C, Wang Y, Chen J, Nie Y, Wang W, Cui J, Wang G, Hoffman AR, Hu JF, Li W. Zhu Y, et al. Among authors: wang w, wang g, wang y, wang c. Mol Ther. 2023 Jun 7;31(6):1791-1806. doi: 10.1016/j.ymthe.2022.12.010. Epub 2022 Dec 15. Mol Ther. 2023. PMID: 36523163 Free PMC article.
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