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Phylogenomic approaches to determine the zoonotic potential of Shiga toxin-producing Escherichia coli (STEC) isolated from Zambian dairy cattle.
Mainda G, Lupolova N, Sikakwa L, Bessell PR, Muma JB, Hoyle DV, McAteer SP, Gibbs K, Williams NJ, Sheppard SK, La Ragione RM, Cordoni G, Argyle SA, Wagner S, Chase-Topping ME, Dallman TJ, Stevens MP, Bronsvoort BM, Gally DL. Mainda G, et al. Among authors: sheppard sk. Sci Rep. 2016 May 25;6:26589. doi: 10.1038/srep26589. Sci Rep. 2016. PMID: 27220895 Free PMC article.
Weak Epistasis May Drive Adaptation in Recombining Bacteria.
Arnold BJ, Gutmann MU, Grad YH, Sheppard SK, Corander J, Lipsitch M, Hanage WP. Arnold BJ, et al. Among authors: sheppard sk. Genetics. 2018 Mar;208(3):1247-1260. doi: 10.1534/genetics.117.300662. Epub 2018 Jan 12. Genetics. 2018. PMID: 29330348 Free PMC article.
Population genomics of bacterial host adaptation.
Sheppard SK, Guttman DS, Fitzgerald JR. Sheppard SK, et al. Nat Rev Genet. 2018 Sep;19(9):549-565. doi: 10.1038/s41576-018-0032-z. Nat Rev Genet. 2018. PMID: 29973680 Review.
Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations.
McNally A, Oren Y, Kelly D, Pascoe B, Dunn S, Sreecharan T, Vehkala M, Välimäki N, Prentice MB, Ashour A, Avram O, Pupko T, Dobrindt U, Literak I, Guenther S, Schaufler K, Wieler LH, Zhiyong Z, Sheppard SK, McInerney JO, Corander J. McNally A, et al. Among authors: sheppard sk. PLoS Genet. 2016 Sep 12;12(9):e1006280. doi: 10.1371/journal.pgen.1006280. eCollection 2016 Sep. PLoS Genet. 2016. PMID: 27618184 Free PMC article.
Corrigendum: Genome Reduction for Niche Association in Campylobacter Hepaticus, A Cause of Spotty Liver Disease in Poultry.
Petrovska L, Tang Y, Jansen van Rensburg MJ, Cawthraw S, Nunez J, Sheppard SK, Ellis RJ, Whatmore AM, Crawshaw TR, Irvine RM. Petrovska L, et al. Among authors: sheppard sk. Front Cell Infect Microbiol. 2017 Nov 14;7:480. doi: 10.3389/fcimb.2017.00480. eCollection 2017. Front Cell Infect Microbiol. 2017. PMID: 29159159 Free PMC article.
176 results