Fang L - Search Results

1

A deep learning framework to predict binding preference of RNA constituents on protein surface.

Lam JH, Li Y, Zhu L, Umarov R, Jiang H, Héliou A, Sheong FK, Liu T, Long Y, Li Y, Fang L, Altman RB, Chen W, Huang X, Gao X. Lam JH, et al. Among authors: fang l. Nat Commun. 2019 Oct 30;10(1):4941. doi: 10.1038/s41467-019-12920-0. Nat Commun. 2019. PMID: 31666519 Free PMC article.

2

The evolution of posttranscriptional regulation.

Schaefke B, Sun W, Li YS, Fang L, Chen W. Schaefke B, et al. Among authors: fang l. Wiley Interdiscip Rev RNA. 2018 Sep;9(5):e1485. doi: 10.1002/wrna.1485. Epub 2018 May 31. Wiley Interdiscip Rev RNA. 2018. PMID: 29851258 Review.

3

Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus.

Wang X, You X, Langer JD, Hou J, Rupprecht F, Vlatkovic I, Quedenau C, Tushev G, Epstein I, Schaefke B, Sun W, Fang L, Li G, Hu Y, Schuman EM, Chen W. Wang X, et al. Among authors: fang l. Nat Commun. 2019 Nov 1;10(1):5009. doi: 10.1038/s41467-019-13037-0. Nat Commun. 2019. PMID: 31676752 Free PMC article.

4

Pan-tissue analysis of allelic alternative polyadenylation suggests widespread functional regulation.

Li Y, Schaefke B, Zou X, Zhang M, Heyd F, Sun W, Zhang B, Li G, Liang W, He Y, Zhou J, Li Y, Fang L, Hu Y, Chen W. Li Y, et al. Among authors: fang l. Mol Syst Biol. 2020 Apr;16(4):e9367. doi: 10.15252/msb.20199367. Mol Syst Biol. 2020. PMID: 32311237 Free PMC article.

5

Integrative multi-omics analysis of a colon cancer cell line with heterogeneous Wnt activity revealed RUNX2 as an epigenetic regulator of EMT.

Yi H, Li G, Long Y, Liang W, Cui H, Zhang B, Tan Y, Li Y, Shen L, Deng D, Tang Y, Mao C, Tian S, Cai Y, Zhu Q, Hu Y, Chen W, Fang L. Yi H, et al. Among authors: fang l. Oncogene. 2020 Jul;39(28):5152-5164. doi: 10.1038/s41388-020-1351-z. Epub 2020 Jun 13. Oncogene. 2020. PMID: 32535615

6

FlsnRNA-seq: protoplasting-free full-length single-nucleus RNA profiling in plants.

Long Y, Liu Z, Jia J, Mo W, Fang L, Lu D, Liu B, Zhang H, Chen W, Zhai J. Long Y, et al. Among authors: fang l. Genome Biol. 2021 Feb 19;22(1):66. doi: 10.1186/s13059-021-02288-0. Genome Biol. 2021. PMID: 33608047 Free PMC article.

7

CASB: a concanavalin A-based sample barcoding strategy for single-cell sequencing.

Fang L, Li G, Sun Z, Zhu Q, Cui H, Li Y, Zhang J, Liang W, Wei W, Hu Y, Chen W. Fang L, et al. Mol Syst Biol. 2021 Apr;17(4):e10060. doi: 10.15252/msb.202010060. Mol Syst Biol. 2021. PMID: 33821571 Free PMC article.

8

CRISPR-iPAS: a novel dCAS13-based method for alternative polyadenylation interference.

Tian S, Zhang B, He Y, Sun Z, Li J, Li Y, Yi H, Zhao Y, Zou X, Li Y, Cui H, Fang L, Gao X, Hu Y, Chen W. Tian S, et al. Among authors: fang l. Nucleic Acids Res. 2022 Mar 21;50(5):e26. doi: 10.1093/nar/gkac108. Nucleic Acids Res. 2022. PMID: 35191504 Free PMC article.

9

The SWI/SNF chromatin remodeling factor DPF3 regulates metastasis of ccRCC by modulating TGF-β signaling.

Cui H, Yi H, Bao H, Tan Y, Tian C, Shi X, Gan D, Zhang B, Liang W, Chen R, Zhu Q, Fang L, Gao X, Huang H, Tian R, Sperling SR, Hu Y, Chen W. Cui H, et al. Among authors: fang l. Nat Commun. 2022 Aug 9;13(1):4680. doi: 10.1038/s41467-022-32472-0. Nat Commun. 2022. PMID: 35945219 Free PMC article.

10

Single cell multi-omics reveal intra-cell-line heterogeneity across human cancer cell lines.

Zhu Q, Zhao X, Zhang Y, Li Y, Liu S, Han J, Sun Z, Wang C, Deng D, Wang S, Tang Y, Huang Y, Jiang S, Tian C, Chen X, Yuan Y, Li Z, Yang T, Lai T, Liu Y, Yang W, Zou X, Zhang M, Cui H, Liu C, Jin X, Hu Y, Chen A, Xu X, Li G, Hou Y, Liu L, Liu S, Fang L, Chen W, Wu L. Zhu Q, et al. Among authors: fang l. Nat Commun. 2023 Dec 9;14(1):8170. doi: 10.1038/s41467-023-43991-9. Nat Commun. 2023. PMID: 38071219 Free PMC article.

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