Lichtenberg J - Search Results

1

Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of hematopoietic cells.

Hardison RC, Zhang Y, Keller CA, Xiang G, Heuston EF, An L, Lichtenberg J, Giardine BM, Bodine D, Mahony S, Li Q, Yue F, Weiss MJ, Blobel GA, Taylor J, Hughes J, Higgs DR, Göttgens B. Hardison RC, et al. Among authors: lichtenberg j. IUBMB Life. 2020 Jan;72(1):27-38. doi: 10.1002/iub.2195. Epub 2019 Nov 25. IUBMB Life. 2020. PMID: 31769130 Free PMC article. Review.

2

Genome-wide detection of a TFIID localization element from an initial human disease mutation.

Yang MQ, Laflamme K, Gotea V, Joiner CH, Seidel NE, Wong C, Petrykowska HM, Lichtenberg J, Lee S, Welch L, Gallagher PG, Bodine DM, Elnitski L. Yang MQ, et al. Among authors: lichtenberg j. Nucleic Acids Res. 2011 Mar;39(6):2175-87. doi: 10.1093/nar/gkq1035. Epub 2010 Nov 11. Nucleic Acids Res. 2011. PMID: 21071415 Free PMC article.

3

Genome-wide DNA methylation profiles in hematopoietic stem and progenitor cells reveal overrepresentation of ETS transcription factor binding sites.

Hogart A, Lichtenberg J, Ajay SS, Anderson S; NIH Intramural Sequencing Center; Margulies EH, Bodine DM. Hogart A, et al. Among authors: lichtenberg j. Genome Res. 2012 Aug;22(8):1407-18. doi: 10.1101/gr.132878.111. Epub 2012 Jun 8. Genome Res. 2012. PMID: 22684279 Free PMC article.

4

Metastasis-associated protein ribosomal RNA processing 1 homolog B (RRP1B) modulates metastasis through regulation of histone methylation.

Lee M, Dworkin AM, Lichtenberg J, Patel SJ, Trivedi NS, Gildea D, Bodine DM, Crawford NP. Lee M, et al. Among authors: lichtenberg j. Mol Cancer Res. 2014 Dec;12(12):1818-28. doi: 10.1158/1541-7786.MCR-14-0167. Epub 2014 Aug 4. Mol Cancer Res. 2014. PMID: 25092915 Free PMC article.

5

Necdin is a breast cancer metastasis suppressor that regulates the transcription of c-Myc.

Lee M, Beggs SM, Gildea D, Bupp S, Lichtenberg J, Trivedi NS; NISC Comparative Sequencing Program; Hu Y, Bodine DM, Crawford NP. Lee M, et al. Among authors: lichtenberg j. Oncotarget. 2015 Oct 13;6(31):31557-68. doi: 10.18632/oncotarget.5230. Oncotarget. 2015. PMID: 26384308 Free PMC article.

6

SBR-Blood: systems biology repository for hematopoietic cells.

Lichtenberg J, Heuston EF, Mishra T, Keller CA, Hardison RC, Bodine DM. Lichtenberg J, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D925-31. doi: 10.1093/nar/gkv1263. Epub 2015 Nov 20. Nucleic Acids Res. 2016. PMID: 26590403 Free PMC article.

7

Single-cell profiling of human megakaryocyte-erythroid progenitors identifies distinct megakaryocyte and erythroid differentiation pathways.

Psaila B, Barkas N, Iskander D, Roy A, Anderson S, Ashley N, Caputo VS, Lichtenberg J, Loaiza S, Bodine DM, Karadimitris A, Mead AJ, Roberts I. Psaila B, et al. Among authors: lichtenberg j. Genome Biol. 2016 May 3;17:83. doi: 10.1186/s13059-016-0939-7. Genome Biol. 2016. PMID: 27142433 Free PMC article.

8

Molecular convergence in ex vivo models of Diamond-Blackfan anemia.

O'Brien KA, Farrar JE, Vlachos A, Anderson SM, Tsujiura CA, Lichtenberg J, Blanc L, Atsidaftos E, Elkahloun A, An X, Ellis SR, Lipton JM, Bodine DM. O'Brien KA, et al. Among authors: lichtenberg j. Blood. 2017 Jun 8;129(23):3111-3120. doi: 10.1182/blood-2017-01-760462. Epub 2017 Apr 4. Blood. 2017. PMID: 28377399 Free PMC article.

9

SigSeeker: a peak-calling ensemble approach for constructing epigenetic signatures.

Lichtenberg J, Elnitski L, Bodine DM. Lichtenberg J, et al. Bioinformatics. 2017 Sep 1;33(17):2615-2621. doi: 10.1093/bioinformatics/btx276. Bioinformatics. 2017. PMID: 28449120 Free PMC article.

10

Establishment of regulatory elements during erythro-megakaryopoiesis identifies hematopoietic lineage-commitment points.

Heuston EF, Keller CA, Lichtenberg J, Giardine B, Anderson SM; NIH Intramural Sequencing Center; Hardison RC, Bodine DM. Heuston EF, et al. Among authors: lichtenberg j. Epigenetics Chromatin. 2018 May 28;11(1):22. doi: 10.1186/s13072-018-0195-z. Epigenetics Chromatin. 2018. PMID: 29807547 Free PMC article.

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