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Targeted Amplicon Sequencing for Single-Nucleotide-Polymorphism Genotyping of Attaching and Effacing Escherichia coli O26:H11 Cattle Strains via a High-Throughput Library Preparation Technique.
Ison SA, Delannoy S, Bugarel M, Nagaraja TG, Renter DG, den Bakker HC, Nightingale KK, Fach P, Loneragan GH. Ison SA, et al. Among authors: den bakker hc. Appl Environ Microbiol. 2015 Nov 13;82(2):640-9. doi: 10.1128/AEM.03182-15. Print 2016 Jan 15. Appl Environ Microbiol. 2015. PMID: 26567298 Free PMC article.
Dissemination of the mcr-1 colistin resistance gene.
Webb HE, Granier SA, Marault M, Millemann Y, den Bakker HC, Nightingale KK, Bugarel M, Ison SA, Scott HM, Loneragan GH. Webb HE, et al. Among authors: den bakker hc. Lancet Infect Dis. 2016 Feb;16(2):144-5. doi: 10.1016/S1473-3099(15)00538-1. Epub 2015 Dec 18. Lancet Infect Dis. 2016. PMID: 26711363 No abstract available.
Interrogation of single nucleotide polymorphisms in gnd provides a novel method for molecular serogrouping of clinically important Shiga toxin producing Escherichia coli (STEC) targeted by regulation in the United States, including the "big six" non-O157 STEC and STEC O157.
Elder JR, Bugarel M, den Bakker HC, Loneragan GH, Nightingale KK. Elder JR, et al. Among authors: den bakker hc. J Microbiol Methods. 2016 Oct;129:85-93. doi: 10.1016/j.mimet.2016.07.005. Epub 2016 Jul 16. J Microbiol Methods. 2016. PMID: 27432340
Complete Genome Sequences of Four Salmonella enterica Strains (Including Those of Serotypes Montevideo, Mbandaka, and Lubbock) Isolated from Peripheral Lymph Nodes of Healthy Cattle.
Bugarel M, Cook PW, den Bakker HC, Harhay D, Nightingale KK, Loneragan GH. Bugarel M, et al. Among authors: den bakker hc. Microbiol Resour Announc. 2019 Jan 10;8(2):e01450-18. doi: 10.1128/MRA.01450-18. eCollection 2019 Jan. Microbiol Resour Announc. 2019. PMID: 30643887 Free PMC article.
High-Resolution Genomic Comparisons within Salmonella enterica Serotypes Derived from Beef Feedlot Cattle: Parsing the Roles of Cattle Source, Pen, Animal, Sample Type, and Production Period.
Levent G, Schlochtermeier A, Ives SE, Norman KN, Lawhon SD, Loneragan GH, Anderson RC, Vinasco J, den Bakker HC, Scott HM. Levent G, et al. Among authors: den bakker hc. Appl Environ Microbiol. 2021 May 26;87(12):e0048521. doi: 10.1128/AEM.00485-21. Epub 2021 May 26. Appl Environ Microbiol. 2021. PMID: 33863705 Free PMC article.
77 results