Su X - Search Results

1

Mutational and transcriptomic landscapes of a rare human prostate basal cell carcinoma.

Su X, Long Q, Bo J, Shi Y, Zhao LN, Lin Y, Luo Q, Ghazanfar S, Zhang C, Liu Q, Wang L, He K, He J, Cui X, Yang JYH, Han ZG, Yang G, Sha JJ. Su X, et al. Prostate. 2020 May;80(6):508-517. doi: 10.1002/pros.23965. Epub 2020 Mar 2. Prostate. 2020. PMID: 32119131

2

Chromatin accessibility contributes to simultaneous mutations of cancer genes.

Shi Y, Su XB, He KY, Wu BH, Zhang BY, Han ZG. Shi Y, et al. Sci Rep. 2016 Oct 20;6:35270. doi: 10.1038/srep35270. Sci Rep. 2016. PMID: 27762310 Free PMC article.

3

Conditional knockin of Dnmt3a R878H initiates acute myeloid leukemia with mTOR pathway involvement.

Dai YJ, Wang YY, Huang JY, Xia L, Shi XD, Xu J, Lu J, Su XB, Yang Y, Zhang WN, Wang PP, Wu SF, Huang T, Mi JQ, Han ZG, Chen Z, Chen SJ. Dai YJ, et al. Proc Natl Acad Sci U S A. 2017 May 16;114(20):5237-5242. doi: 10.1073/pnas.1703476114. Epub 2017 May 1. Proc Natl Acad Sci U S A. 2017. PMID: 28461508 Free PMC article.

4

Single-cell RNA-Seq analysis reveals dynamic trajectories during mouse liver development.

Su X, Shi Y, Zou X, Lu ZN, Xie G, Yang JYH, Wu CC, Cui XF, He KY, Luo Q, Qu YL, Wang N, Wang L, Han ZG. Su X, et al. BMC Genomics. 2017 Dec 4;18(1):946. doi: 10.1186/s12864-017-4342-x. BMC Genomics. 2017. PMID: 29202695 Free PMC article.

5

Cancer type prediction based on copy number aberration and chromatin 3D structure with convolutional neural networks.

Yuan Y, Shi Y, Su X, Zou X, Luo Q, Feng DD, Cai W, Han ZG. Yuan Y, et al. Among authors: su x. BMC Genomics. 2018 Aug 13;19(Suppl 6):565. doi: 10.1186/s12864-018-4919-z. BMC Genomics. 2018. PMID: 30367576 Free PMC article.

6

Application of qPCR assays based on haloacids transporter gene dehp2 for discrimination of Burkholderia and Paraburkholderia.

Su X, Shi Y, Li R, Lu ZN, Zou X, Wu JX, Han ZG. Su X, et al. BMC Microbiol. 2019 Feb 11;19(1):36. doi: 10.1186/s12866-019-1411-0. BMC Microbiol. 2019. PMID: 30744555 Free PMC article.

7

scMerge leverages factor analysis, stable expression, and pseudoreplication to merge multiple single-cell RNA-seq datasets.

Lin Y, Ghazanfar S, Wang KYX, Gagnon-Bartsch JA, Lo KK, Su X, Han ZG, Ormerod JT, Speed TP, Yang P, Yang JYH. Lin Y, et al. Among authors: su x. Proc Natl Acad Sci U S A. 2019 May 14;116(20):9775-9784. doi: 10.1073/pnas.1820006116. Epub 2019 Apr 26. Proc Natl Acad Sci U S A. 2019. PMID: 31028141 Free PMC article.

8

DeepAntigen: a novel method for neoantigen prioritization via 3D genome and deep sparse learning.

Shi Y, Guo Z, Su X, Meng L, Zhang M, Sun J, Wu C, Zheng M, Shang X, Zou X, Cheng W, Yu Y, Cai Y, Zhang C, Cai W, Da LT, He G, Han ZG. Shi Y, et al. Among authors: su x. Bioinformatics. 2020 Dec 8;36(19):4894-4901. doi: 10.1093/bioinformatics/btaa596. Bioinformatics. 2020. PMID: 32592462

9

Investigating higher-order interactions in single-cell data with scHOT.

Ghazanfar S, Lin Y, Su X, Lin DM, Patrick E, Han ZG, Marioni JC, Yang JYH. Ghazanfar S, et al. Among authors: su x. Nat Methods. 2020 Aug;17(8):799-806. doi: 10.1038/s41592-020-0885-x. Epub 2020 Jul 13. Nat Methods. 2020. PMID: 32661426 Free PMC article.

10

[A method for reliable detection of genomic point mutations based on single-cell target-sequencing].

Zhao LN, Wang N, Yang GL, Su XB, Han ZG. Zhao LN, et al. Yi Chuan. 2020 Jul 20;42(7):703-712. doi: 10.16288/j.yczz.20-046. Yi Chuan. 2020. PMID: 32694109 Chinese.

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