Sgourakis NG - Search Results

1

Computational design of closely related proteins that adopt two well-defined but structurally divergent folds.

Wei KY, Moschidi D, Bick MJ, Nerli S, McShan AC, Carter LP, Huang PS, Fletcher DA, Sgourakis NG, Boyken SE, Baker D. Wei KY, et al. Among authors: sgourakis ng. Proc Natl Acad Sci U S A. 2020 Mar 31;117(13):7208-7215. doi: 10.1073/pnas.1914808117. Epub 2020 Mar 18. Proc Natl Acad Sci U S A. 2020. PMID: 32188784 Free PMC article.

2

Determination of the structures of symmetric protein oligomers from NMR chemical shifts and residual dipolar couplings.

Sgourakis NG, Lange OF, DiMaio F, André I, Fitzkee NC, Rossi P, Montelione GT, Bax A, Baker D. Sgourakis NG, et al. J Am Chem Soc. 2011 Apr 27;133(16):6288-98. doi: 10.1021/ja111318m. Epub 2011 Apr 5. J Am Chem Soc. 2011. PMID: 21466200 Free PMC article.

3

Accurate protein structure modeling using sparse NMR data and homologous structure information.

Thompson JM, Sgourakis NG, Liu G, Rossi P, Tang Y, Mills JL, Szyperski T, Montelione GT, Baker D. Thompson JM, et al. Among authors: sgourakis ng. Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):9875-80. doi: 10.1073/pnas.1202485109. Epub 2012 Jun 4. Proc Natl Acad Sci U S A. 2012. PMID: 22665781 Free PMC article.

4

Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples.

Lange OF, Rossi P, Sgourakis NG, Song Y, Lee HW, Aramini JM, Ertekin A, Xiao R, Acton TB, Montelione GT, Baker D. Lange OF, et al. Among authors: sgourakis ng. Proc Natl Acad Sci U S A. 2012 Jul 3;109(27):10873-8. doi: 10.1073/pnas.1203013109. Epub 2012 Jun 25. Proc Natl Acad Sci U S A. 2012. PMID: 22733734 Free PMC article.

5

The NMR-Rosetta capsid model of M13 bacteriophage reveals a quadrupled hydrophobic packing epitope.

Morag O, Sgourakis NG, Baker D, Goldbourt A. Morag O, et al. Among authors: sgourakis ng. Proc Natl Acad Sci U S A. 2015 Jan 27;112(4):971-6. doi: 10.1073/pnas.1415393112. Epub 2015 Jan 13. Proc Natl Acad Sci U S A. 2015. PMID: 25587134 Free PMC article.

6

An allosteric site in the T-cell receptor Cβ domain plays a critical signalling role.

Natarajan K, McShan AC, Jiang J, Kumirov VK, Wang R, Zhao H, Schuck P, Tilahun ME, Boyd LF, Ying J, Bax A, Margulies DH, Sgourakis NG. Natarajan K, et al. Among authors: sgourakis ng. Nat Commun. 2017 May 16;8:15260. doi: 10.1038/ncomms15260. Nat Commun. 2017. PMID: 28508865 Free PMC article.

7

Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra.

Evangelidis T, Nerli S, Nováček J, Brereton AE, Karplus PA, Dotas RR, Venditti V, Sgourakis NG, Tripsianes K. Evangelidis T, et al. Among authors: sgourakis ng. Nat Commun. 2018 Jan 26;9(1):384. doi: 10.1038/s41467-017-02592-z. Nat Commun. 2018. PMID: 29374165 Free PMC article.

8

A Recurrent Mutation in Anaplastic Lymphoma Kinase with Distinct Neoepitope Conformations.

Toor JS, Rao AA, McShan AC, Yarmarkovich M, Nerli S, Yamaguchi K, Madejska AA, Nguyen S, Tripathi S, Maris JM, Salama SR, Haussler D, Sgourakis NG. Toor JS, et al. Among authors: sgourakis ng. Front Immunol. 2018 Jan 30;9:99. doi: 10.3389/fimmu.2018.00099. eCollection 2018. Front Immunol. 2018. PMID: 29441070 Free PMC article.

9

Peptide exchange on MHC-I by TAPBPR is driven by a negative allostery release cycle.

McShan AC, Natarajan K, Kumirov VK, Flores-Solis D, Jiang J, Badstübner M, Toor JS, Bagshaw CR, Kovrigin EL, Margulies DH, Sgourakis NG. McShan AC, et al. Among authors: sgourakis ng. Nat Chem Biol. 2018 Aug;14(8):811-820. doi: 10.1038/s41589-018-0096-2. Epub 2018 Jul 9. Nat Chem Biol. 2018. PMID: 29988068 Free PMC article.

10

The Role of Molecular Flexibility in Antigen Presentation and T Cell Receptor-Mediated Signaling.

Natarajan K, Jiang J, May NA, Mage MG, Boyd LF, McShan AC, Sgourakis NG, Bax A, Margulies DH. Natarajan K, et al. Among authors: sgourakis ng. Front Immunol. 2018 Jul 17;9:1657. doi: 10.3389/fimmu.2018.01657. eCollection 2018. Front Immunol. 2018. PMID: 30065727 Free PMC article. Review.

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