Nardini JT - Search Results

1

Learning partial differential equations for biological transport models from noisy spatio-temporal data.

Lagergren JH, Nardini JT, Michael Lavigne G, Rutter EM, Flores KB. Lagergren JH, et al. Among authors: nardini jt. Proc Math Phys Eng Sci. 2020 Feb;476(2234):20190800. doi: 10.1098/rspa.2019.0800. Epub 2020 Feb 19. Proc Math Phys Eng Sci. 2020. PMID: 32201481 Free PMC article.

2

Learning Equations from Biological Data with Limited Time Samples.

Nardini JT, Lagergren JH, Hawkins-Daarud A, Curtin L, Morris B, Rutter EM, Swanson KR, Flores KB. Nardini JT, et al. Bull Math Biol. 2020 Sep 9;82(9):119. doi: 10.1007/s11538-020-00794-z. Bull Math Biol. 2020. PMID: 32909137 Free PMC article.

3

A tutorial review of mathematical techniques for quantifying tumor heterogeneity.

Everett R, Flores KB, Henscheid N, Lagergren J, Larripa K, Li D, Nardini JT, Nguyen PTT, Pitman EB, Rutter EM. Everett R, et al. Among authors: nardini jt. Math Biosci Eng. 2020 May 19;17(4):3660-3709. doi: 10.3934/mbe.2020207. Math Biosci Eng. 2020. PMID: 32987550 Free article. Review.

4

Biologically-informed neural networks guide mechanistic modeling from sparse experimental data.

Lagergren JH, Nardini JT, Baker RE, Simpson MJ, Flores KB. Lagergren JH, et al. Among authors: nardini jt. PLoS Comput Biol. 2020 Dec 1;16(12):e1008462. doi: 10.1371/journal.pcbi.1008462. eCollection 2020 Dec. PLoS Comput Biol. 2020. PMID: 33259472 Free PMC article.

5

Learning differential equation models from stochastic agent-based model simulations.

Nardini JT, Baker RE, Simpson MJ, Flores KB. Nardini JT, et al. J R Soc Interface. 2021 Mar;18(176):20200987. doi: 10.1098/rsif.2020.0987. Epub 2021 Mar 17. J R Soc Interface. 2021. PMID: 33726540 Free PMC article.

6

Topological data analysis distinguishes parameter regimes in the Anderson-Chaplain model of angiogenesis.

Nardini JT, Stolz BJ, Flores KB, Harrington HA, Byrne HM. Nardini JT, et al. PLoS Comput Biol. 2021 Jun 28;17(6):e1009094. doi: 10.1371/journal.pcbi.1009094. eCollection 2021 Jun. PLoS Comput Biol. 2021. PMID: 34181657 Free PMC article.

7

Quantifying collective motion patterns in mesenchymal cell populations using topological data analysis and agent-based modeling.

Nguyen KC, Jameson CD, Baldwin SA, Nardini JT, Smith RC, Haugh JM, Flores KB. Nguyen KC, et al. Among authors: nardini jt. Math Biosci. 2024 Apr;370:109158. doi: 10.1016/j.mbs.2024.109158. Epub 2024 Feb 17. Math Biosci. 2024. PMID: 38373479

8

The influence of numerical error on parameter estimation and uncertainty quantification for advective PDE models.

Nardini JT, Bortz DM. Nardini JT, et al. Inverse Probl. 2019 Jun;35(6):065003. doi: 10.1088/1361-6420/ab10bb. Epub 2019 May 29. Inverse Probl. 2019. PMID: 34121793 Free PMC article.

9

INVESTIGATION OF A STRUCTURED FISHER'S EQUATION WITH APPLICATIONS IN BIOCHEMISTRY.

Nardini JT, Bortz DM. Nardini JT, et al. SIAM J Appl Math. 2018;78(3):1712-1736. doi: 10.1137/16M1108546. Epub 2018 Jun 19. SIAM J Appl Math. 2018. PMID: 30636816 Free PMC article.

10

Forecasting and Predicting Stochastic Agent-Based Model Data with Biologically-Informed Neural Networks.

Nardini JT. Nardini JT. Bull Math Biol. 2024 Sep 23;86(11):130. doi: 10.1007/s11538-024-01357-2. Bull Math Biol. 2024. PMID: 39307859

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