Coin LJM - Search Results

1

Complete Genome Sequences of Clinical Pandoraea fibrosis Isolates.

Pitt ME, Nguyen SH, Duarte TPS, Roddam LF, Blaskovich MAT, Cooper MA, Coin LJM. Pitt ME, et al. Among authors: coin ljm. Microbiol Resour Announc. 2020 Mar 26;9(13):e00060-20. doi: 10.1128/MRA.00060-20. Microbiol Resour Announc. 2020. PMID: 32217674 Free PMC article.

2

Realtime analysis and visualization of MinION sequencing data with npReader.

Cao MD, Ganesamoorthy D, Cooper MA, Coin LJ. Cao MD, et al. Bioinformatics. 2016 Mar 1;32(5):764-6. doi: 10.1093/bioinformatics/btv658. Epub 2015 Nov 10. Bioinformatics. 2016. PMID: 26556383 Free article.

3

Complete Genome Sequence of Klebsiella quasipneumoniae subsp. similipneumoniae Strain ATCC 700603.

Elliott AG, Ganesamoorthy D, Coin L, Cooper MA, Cao MD. Elliott AG, et al. Genome Announc. 2016 May 26;4(3):e00438-16. doi: 10.1128/genomeA.00438-16. Genome Announc. 2016. PMID: 27231369 Free PMC article.

4

Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION(TM) sequencing.

Cao MD, Ganesamoorthy D, Elliott AG, Zhang H, Cooper MA, Coin LJ. Cao MD, et al. Gigascience. 2016 Jul 26;5(1):32. doi: 10.1186/s13742-016-0137-2. Gigascience. 2016. PMID: 27457073 Free PMC article.

5

Scaffolding and completing genome assemblies in real-time with nanopore sequencing.

Cao MD, Nguyen SH, Ganesamoorthy D, Elliott AG, Cooper MA, Coin LJ. Cao MD, et al. Nat Commun. 2017 Feb 20;8:14515. doi: 10.1038/ncomms14515. Nat Commun. 2017. PMID: 28218240 Free PMC article.

6

Real-time demultiplexing Nanopore barcoded sequencing data with npBarcode.

Nguyen SH, Duarte TPS, Coin LJM, Cao MD. Nguyen SH, et al. Among authors: coin ljm. Bioinformatics. 2017 Dec 15;33(24):3988-3990. doi: 10.1093/bioinformatics/btx537. Bioinformatics. 2017. PMID: 28961965

7

Multifactorial chromosomal variants regulate polymyxin resistance in extensively drug-resistant Klebsiella pneumoniae.

Pitt ME, Elliott AG, Cao MD, Ganesamoorthy D, Karaiskos I, Giamarellou H, Abboud CS, Blaskovich MAT, Cooper MA, Coin LJM. Pitt ME, et al. Among authors: coin ljm. Microb Genom. 2018 Mar;4(3):e000158. doi: 10.1099/mgen.0.000158. Epub 2018 Feb 12. Microb Genom. 2018. PMID: 29431605 Free PMC article.

8

Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning.

Teng H, Cao MD, Hall MB, Duarte T, Wang S, Coin LJM. Teng H, et al. Among authors: coin ljm. Gigascience. 2018 May 1;7(5):giy037. doi: 10.1093/gigascience/giy037. Gigascience. 2018. PMID: 29648610 Free PMC article.

9

Non-antibiotic antimicrobial triclosan induces multiple antibiotic resistance through genetic mutation.

Lu J, Jin M, Nguyen SH, Mao L, Li J, Coin LJM, Yuan Z, Guo J. Lu J, et al. Among authors: coin ljm. Environ Int. 2018 Sep;118:257-265. doi: 10.1016/j.envint.2018.06.004. Epub 2018 Jun 11. Environ Int. 2018. PMID: 29902774

10

npInv: accurate detection and genotyping of inversions using long read sub-alignment.

Shao H, Ganesamoorthy D, Duarte T, Cao MD, Hoggart CJ, Coin LJM. Shao H, et al. Among authors: coin ljm. BMC Bioinformatics. 2018 Jul 13;19(1):261. doi: 10.1186/s12859-018-2252-9. BMC Bioinformatics. 2018. PMID: 30001702 Free PMC article.

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