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Page 1
Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f.
Chen ML, Becraft ED, Pachiadaki M, Brown JM, Jarett JK, Gasol JM, Ravin NV, Moser DP, Nunoura T, Herndl GJ, Woyke T, Stepanauskas R. Chen ML, et al. Among authors: stepanauskas r. Front Microbiol. 2020 Mar 12;11:376. doi: 10.3389/fmicb.2020.00376. eCollection 2020. Front Microbiol. 2020. PMID: 32226422 Free PMC article.
Novel integrative elements and genomic plasticity in ocean ecosystems.
Hackl T, Laurenceau R, Ankenbrand MJ, Bliem C, Cariani Z, Thomas E, Dooley KD, Arellano AA, Hogle SL, Berube P, Leventhal GE, Luo E, Eppley JM, Zayed AA, Beaulaurier J, Stepanauskas R, Sullivan MB, DeLong EF, Biller SJ, Chisholm SW. Hackl T, et al. Among authors: stepanauskas r. Cell. 2023 Jan 5;186(1):47-62.e16. doi: 10.1016/j.cell.2022.12.006. Cell. 2023. PMID: 36608657 Free article.
Genomic sequencing of single microbial cells from environmental samples.
Ishoey T, Woyke T, Stepanauskas R, Novotny M, Lasken RS. Ishoey T, et al. Among authors: stepanauskas r. Curr Opin Microbiol. 2008 Jun;11(3):198-204. doi: 10.1016/j.mib.2008.05.006. Epub 2008 Jun 10. Curr Opin Microbiol. 2008. PMID: 18550420 Free PMC article. Review.
Assembling the marine metagenome, one cell at a time.
Woyke T, Xie G, Copeland A, González JM, Han C, Kiss H, Saw JH, Senin P, Yang C, Chatterji S, Cheng JF, Eisen JA, Sieracki ME, Stepanauskas R. Woyke T, et al. Among authors: stepanauskas r. PLoS One. 2009;4(4):e5299. doi: 10.1371/journal.pone.0005299. Epub 2009 Apr 23. PLoS One. 2009. PMID: 19390573 Free PMC article.
Decontamination of MDA reagents for single cell whole genome amplification.
Woyke T, Sczyrba A, Lee J, Rinke C, Tighe D, Clingenpeel S, Malmstrom R, Stepanauskas R, Cheng JF. Woyke T, et al. Among authors: stepanauskas r. PLoS One. 2011;6(10):e26161. doi: 10.1371/journal.pone.0026161. Epub 2011 Oct 20. PLoS One. 2011. PMID: 22028825 Free PMC article.
Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean.
Swan BK, Tupper B, Sczyrba A, Lauro FM, Martinez-Garcia M, González JM, Luo H, Wright JJ, Landry ZC, Hanson NW, Thompson BP, Poulton NJ, Schwientek P, Acinas SG, Giovannoni SJ, Moran MA, Hallam SJ, Cavicchioli R, Woyke T, Stepanauskas R. Swan BK, et al. Among authors: stepanauskas r. Proc Natl Acad Sci U S A. 2013 Jul 9;110(28):11463-8. doi: 10.1073/pnas.1304246110. Epub 2013 Jun 25. Proc Natl Acad Sci U S A. 2013. PMID: 23801761 Free PMC article.
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products.
Nurk S, Bankevich A, Antipov D, Gurevich AA, Korobeynikov A, Lapidus A, Prjibelski AD, Pyshkin A, Sirotkin A, Sirotkin Y, Stepanauskas R, Clingenpeel SR, Woyke T, McLean JS, Lasken R, Tesler G, Alekseyev MA, Pevzner PA. Nurk S, et al. Among authors: stepanauskas r. J Comput Biol. 2013 Oct;20(10):714-37. doi: 10.1089/cmb.2013.0084. J Comput Biol. 2013. PMID: 24093227 Free PMC article.
Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype.
Thrash JC, Temperton B, Swan BK, Landry ZC, Woyke T, DeLong EF, Stepanauskas R, Giovannoni SJ. Thrash JC, et al. Among authors: stepanauskas r. ISME J. 2014 Jul;8(7):1440-51. doi: 10.1038/ismej.2013.243. Epub 2014 Jan 23. ISME J. 2014. PMID: 24451205 Free PMC article.
135 results