Kasif S - Search Results

1

Single-cell transcriptional networks in differentiating preadipocytes suggest drivers associated with tissue heterogeneity.

Ramirez AK, Dankel SN, Rastegarpanah B, Cai W, Xue R, Crovella M, Tseng YH, Kahn CR, Kasif S. Ramirez AK, et al. Among authors: kasif s. Nat Commun. 2020 Apr 30;11(1):2117. doi: 10.1038/s41467-020-16019-9. Nat Commun. 2020. PMID: 32355218 Free PMC article.

2

Membrane metallo-endopeptidase (Neprilysin) regulates inflammatory response and insulin signaling in white preadipocytes.

Ramirez AK, Dankel S, Cai W, Sakaguchi M, Kasif S, Kahn CR. Ramirez AK, et al. Among authors: kasif s. Mol Metab. 2019 Apr;22:21-36. doi: 10.1016/j.molmet.2019.01.006. Epub 2019 Jan 25. Mol Metab. 2019. PMID: 30795914 Free PMC article.

3

Integrating Extracellular Flux Measurements and Genome-Scale Modeling Reveals Differences between Brown and White Adipocytes.

Ramirez AK, Lynes MD, Shamsi F, Xue R, Tseng YH, Kahn CR, Kasif S, Dreyfuss JM. Ramirez AK, et al. Among authors: kasif s. Cell Rep. 2017 Dec 12;21(11):3040-3048. doi: 10.1016/j.celrep.2017.11.065. Cell Rep. 2017. PMID: 29241534 Free PMC article.

4

A systems biology approach identifies inflammatory abnormalities between mouse strains prior to development of metabolic disease.

Mori MA, Liu M, Bezy O, Almind K, Shapiro H, Kasif S, Kahn CR. Mori MA, et al. Among authors: kasif s. Diabetes. 2010 Nov;59(11):2960-71. doi: 10.2337/db10-0367. Epub 2010 Aug 16. Diabetes. 2010. PMID: 20713682 Free PMC article.

5

Analysis of brain region-specific co-expression networks reveals clustering of established and novel genes associated with Alzheimer disease.

Lancour D, Dupuis J, Mayeux R, Haines JL, Pericak-Vance MA, Schellenberg GC, Crovella M, Farrer LA, Kasif S. Lancour D, et al. Among authors: kasif s. Alzheimers Res Ther. 2020 Sep 2;12(1):103. doi: 10.1186/s13195-020-00674-7. Alzheimers Res Ther. 2020. PMID: 32878640 Free PMC article.

6

One for all and all for One: Improving replication of genetic studies through network diffusion.

Lancour D, Naj A, Mayeux R, Haines JL, Pericak-Vance MA, Schellenberg GD, Crovella M, Farrer LA, Kasif S. Lancour D, et al. Among authors: kasif s. PLoS Genet. 2018 Apr 23;14(4):e1007306. doi: 10.1371/journal.pgen.1007306. eCollection 2018 Apr. PLoS Genet. 2018. PMID: 29684019 Free PMC article.

7

Interpretable network propagation with application to expanding the repertoire of human proteins that interact with SARS-CoV-2.

Law JN, Akers K, Tasnina N, Santina CMD, Deutsch S, Kshirsagar M, Klein-Seetharaman J, Crovella M, Rajagopalan P, Kasif S, Murali TM. Law JN, et al. Among authors: kasif s. Gigascience. 2021 Dec 29;10(12):giab082. doi: 10.1093/gigascience/giab082. Gigascience. 2021. PMID: 34966926 Free PMC article.

8

High-throughput mediation analysis of human proteome and metabolome identifies mediators of post-bariatric surgical diabetes control.

Dreyfuss JM, Yuchi Y, Dong X, Efthymiou V, Pan H, Simonson DC, Vernon A, Halperin F, Aryal P, Konkar A, Sebastian Y, Higgs BW, Grimsby J, Rondinone CM, Kasif S, Kahn BB, Foster K, Seeley R, Goldfine A, Djordjilović V, Patti ME. Dreyfuss JM, et al. Among authors: kasif s. Nat Commun. 2021 Nov 29;12(1):6951. doi: 10.1038/s41467-021-27289-2. Nat Commun. 2021. PMID: 34845204 Free PMC article. Clinical Trial.

9

Biological context networks: a mosaic view of the interactome.

Rachlin J, Cohen DD, Cantor C, Kasif S. Rachlin J, et al. Among authors: kasif s. Mol Syst Biol. 2006;2:66. doi: 10.1038/msb4100103. Epub 2006 Nov 28. Mol Syst Biol. 2006. PMID: 17130868 Free PMC article.

10

Integration of heterogeneous expression data sets extends the role of the retinol pathway in diabetes and insulin resistance.

Park PJ, Kong SW, Tebaldi T, Lai WR, Kasif S, Kohane IS. Park PJ, et al. Among authors: kasif s. Bioinformatics. 2009 Dec 1;25(23):3121-7. doi: 10.1093/bioinformatics/btp559. Epub 2009 Sep 28. Bioinformatics. 2009. PMID: 19786482 Free PMC article.

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