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RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers.
Miao Z, Adamiak RW, Antczak M, Boniecki MJ, Bujnicki J, Chen SJ, Cheng CY, Cheng Y, Chou FC, Das R, Dokholyan NV, Ding F, Geniesse C, Jiang Y, Joshi A, Krokhotin A, Magnus M, Mailhot O, Major F, Mann TH, Piątkowski P, Pluta R, Popenda M, Sarzynska J, Sun L, Szachniuk M, Tian S, Wang J, Wang J, Watkins AM, Wiedemann J, Xiao Y, Xu X, Yesselman JD, Zhang D, Zhang Y, Zhang Z, Zhao C, Zhao P, Zhou Y, Zok T, Żyła A, Ren A, Batey RT, Golden BL, Huang L, Lilley DM, Liu Y, Patel DJ, Westhof E. Miao Z, et al. Among authors: wiedemann j. RNA. 2020 Aug;26(8):982-995. doi: 10.1261/rna.075341.120. Epub 2020 May 5. RNA. 2020. PMID: 32371455 Free PMC article.
LCS-TA to identify similar fragments in RNA 3D structures.
Wiedemann J, Zok T, Milostan M, Szachniuk M. Wiedemann J, et al. BMC Bioinformatics. 2017 Oct 23;18(1):456. doi: 10.1186/s12859-017-1867-6. BMC Bioinformatics. 2017. PMID: 29058576 Free PMC article.
RNAloops: a database of RNA multiloops.
Wiedemann J, Kaczor J, Milostan M, Zok T, Blazewicz J, Szachniuk M, Antczak M. Wiedemann J, et al. Bioinformatics. 2022 Sep 2;38(17):4200-4205. doi: 10.1093/bioinformatics/btac484. Bioinformatics. 2022. PMID: 35809063 Free PMC article.
[EndoArt®: results in patients with glaucoma drainage devices].
Wiedemann J, Mestanoglu M, Rekate A, Gietzelt C, Cursiefen C, Bachmann B. Wiedemann J, et al. Ophthalmologie. 2024 Oct;121(10):803-813. doi: 10.1007/s00347-024-02122-5. Epub 2024 Oct 2. Ophthalmologie. 2024. PMID: 39356335 German.
62 results