McBroome J - Search Results

1

One fly-one genome: chromosome-scale genome assembly of a single outbred Drosophila melanogaster.

Adams M, McBroome J, Maurer N, Pepper-Tunick E, Saremi NF, Green RE, Vollmers C, Corbett-Detig RB. Adams M, et al. Among authors: mcbroome j. Nucleic Acids Res. 2020 Jul 27;48(13):e75. doi: 10.1093/nar/gkaa450. Nucleic Acids Res. 2020. PMID: 32491177 Free PMC article.

2

Fine-Mapping Complex Inversion Breakpoints and Investigating Somatic Pairing in the Anopheles gambiae Species Complex Using Proximity-Ligation Sequencing.

Corbett-Detig RB, Said I, Calzetta M, Genetti M, McBroome J, Maurer NW, Petrarca V, Della Torre A, Besansky NJ. Corbett-Detig RB, et al. Among authors: mcbroome j. Genetics. 2019 Dec;213(4):1495-1511. doi: 10.1534/genetics.119.302385. Epub 2019 Oct 30. Genetics. 2019. PMID: 31666292 Free PMC article.

3

Fine-Scale Position Effects Shape the Distribution of Inversion Breakpoints in Drosophila melanogaster.

McBroome J, Liang D, Corbett-Detig R. McBroome J, et al. Genome Biol Evol. 2020 Aug 1;12(8):1378-1391. doi: 10.1093/gbe/evaa103. Genome Biol Evol. 2020. PMID: 32437518 Free PMC article.

4

[No title available]

[No authors listed] [No authors listed] PMID: 33954531

5

[No title available]

[No authors listed] [No authors listed] PMID: 33954566

6

A Daily-Updated Database and Tools for Comprehensive SARS-CoV-2 Mutation-Annotated Trees.

McBroome J, Thornlow B, Hinrichs AS, Kramer A, De Maio N, Goldman N, Haussler D, Corbett-Detig R, Turakhia Y. McBroome J, et al. Mol Biol Evol. 2021 Dec 9;38(12):5819-5824. doi: 10.1093/molbev/msab264. Mol Biol Evol. 2021. PMID: 34469548 Free PMC article.

7

A chromosome-scale genome assembly and karyotype of the ctenophore Hormiphora californensis.

Schultz DT, Francis WR, McBroome JD, Christianson LM, Haddock SHD, Green RE. Schultz DT, et al. Among authors: mcbroome jd. G3 (Bethesda). 2021 Oct 19;11(11):jkab302. doi: 10.1093/g3journal/jkab302. G3 (Bethesda). 2021. PMID: 34545398 Free PMC article.

8

Identifying SARS-CoV-2 regional introductions and transmission clusters in real time.

McBroome J, Martin J, de Bernardi Schneider A, Turakhia Y, Corbett-Detig R. McBroome J, et al. Virus Evol. 2022 Jun 16;8(1):veac048. doi: 10.1093/ve/veac048. eCollection 2022. Virus Evol. 2022. PMID: 35769891 Free PMC article.

9

Pandemic-scale phylogenomics reveals the SARS-CoV-2 recombination landscape.

Turakhia Y, Thornlow B, Hinrichs A, McBroome J, Ayala N, Ye C, Smith K, De Maio N, Haussler D, Lanfear R, Corbett-Detig R. Turakhia Y, et al. Among authors: mcbroome j. Nature. 2022 Sep;609(7929):994-997. doi: 10.1038/s41586-022-05189-9. Epub 2022 Aug 11. Nature. 2022. PMID: 35952714 Free PMC article.

10

A lung-specific mutational signature enables inference of viral and bacterial respiratory niche.

Ruis C, Peacock TP, Polo LM, Masone D, Alvarez MS, Hinrichs AS, Turakhia Y, Cheng Y, McBroome J, Corbett-Detig R, Parkhill J, Floto RA. Ruis C, et al. Among authors: mcbroome j. Microb Genom. 2023 May;9(5):mgen001018. doi: 10.1099/mgen.0.001018. Microb Genom. 2023. PMID: 37185044 Free PMC article.

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