Korkin D - Search Results

1

A hybrid deep clustering approach for robust cell type profiling using single-cell RNA-seq data.

Srinivasan S, Leshchyk A, Johnson NT, Korkin D. Srinivasan S, et al. Among authors: korkin d. RNA. 2020 Oct;26(10):1303-1319. doi: 10.1261/rna.074427.119. Epub 2020 Jun 12. RNA. 2020. PMID: 32532794 Free PMC article.

2

The variation game: Cracking complex genetic disorders with NGS and omics data.

Cui H, Dhroso A, Johnson N, Korkin D. Cui H, et al. Among authors: korkin d. Methods. 2015 Jun;79-80:18-31. doi: 10.1016/j.ymeth.2015.04.018. Epub 2015 May 2. Methods. 2015. PMID: 25944472 Review.

3

Novel global effector mining from the transcriptome of early life stages of the soybean cyst nematode Heterodera glycines.

Gardner M, Dhroso A, Johnson N, Davis EL, Baum TJ, Korkin D, Mitchum MG. Gardner M, et al. Among authors: korkin d. Sci Rep. 2018 Feb 6;8(1):2505. doi: 10.1038/s41598-018-20536-5. Sci Rep. 2018. PMID: 29410430 Free PMC article.

4

Biological classification with RNA-seq data: Can alternatively spliced transcript expression enhance machine learning classifiers?

Johnson NT, Dhroso A, Hughes KJ, Korkin D. Johnson NT, et al. Among authors: korkin d. RNA. 2018 Sep;24(9):1119-1132. doi: 10.1261/rna.062802.117. Epub 2018 Jun 25. RNA. 2018. PMID: 29941426 Free PMC article.

5

Multilayer View of Pathogenic SNVs in Human Interactome through In Silico Edgetic Profiling.

Cui H, Zhao N, Korkin D. Cui H, et al. Among authors: korkin d. J Mol Biol. 2018 Sep 14;430(18 Pt A):2974-2992. doi: 10.1016/j.jmb.2018.07.012. Epub 2018 Jul 12. J Mol Biol. 2018. PMID: 30017919

6

The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes.

Masonbrink R, Maier TR, Muppirala U, Seetharam AS, Lord E, Juvale PS, Schmutz J, Johnson NT, Korkin D, Mitchum MG, Mimee B, den Akker SE, Hudson M, Severin AJ, Baum TJ. Masonbrink R, et al. Among authors: korkin d. BMC Genomics. 2019 Feb 7;20(1):119. doi: 10.1186/s12864-019-5485-8. BMC Genomics. 2019. PMID: 30732586 Free PMC article.

7

Assessment of network module identification across complex diseases.

Choobdar S, Ahsen ME, Crawford J, Tomasoni M, Fang T, Lamparter D, Lin J, Hescott B, Hu X, Mercer J, Natoli T, Narayan R; DREAM Module Identification Challenge Consortium; Subramanian A, Zhang JD, Stolovitzky G, Kutalik Z, Lage K, Slonim DK, Saez-Rodriguez J, Cowen LJ, Bergmann S, Marbach D. Choobdar S, et al. Nat Methods. 2019 Sep;16(9):843-852. doi: 10.1038/s41592-019-0509-5. Epub 2019 Aug 30. Nat Methods. 2019. PMID: 31471613 Free PMC article.

8

Enriching Human Interactome with Functional Mutations to Detect High-Impact Network Modules Underlying Complex Diseases.

Cui H, Srinivasan S, Korkin D. Cui H, et al. Among authors: korkin d. Genes (Basel). 2019 Nov 15;10(11):933. doi: 10.3390/genes10110933. Genes (Basel). 2019. PMID: 31731769 Free PMC article.

9

Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins.

Srinivasan S, Cui H, Gao Z, Liu M, Lu S, Mkandawire W, Narykov O, Sun M, Korkin D. Srinivasan S, et al. Among authors: korkin d. Viruses. 2020 Mar 25;12(4):360. doi: 10.3390/v12040360. Viruses. 2020. PMID: 32218151 Free PMC article.

10

Computational protein modeling and the next viral pandemic.

Narykov O, Srinivasan S, Korkin D. Narykov O, et al. Among authors: korkin d. Nat Methods. 2021 May;18(5):444-445. doi: 10.1038/s41592-021-01144-0. Nat Methods. 2021. PMID: 33963340 Free PMC article. No abstract available.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

67 results

Search Page

Filters