Clark SJ - Search Results

1

Comprehensive evaluation of targeted multiplex bisulphite PCR sequencing for validation of DNA methylation biomarker panels.

Lam D, Luu PL, Song JZ, Qu W, Risbridger GP, Lawrence MG, Lu J, Trau M, Korbie D, Clark SJ, Pidsley R, Stirzaker C. Lam D, et al. Among authors: clark sj. Clin Epigenetics. 2020 Jun 22;12(1):90. doi: 10.1186/s13148-020-00880-y. Clin Epigenetics. 2020. PMID: 32571390 Free PMC article.

2

Extensive DNA methylation spanning the Rb promoter in retinoblastoma tumors.

Stirzaker C, Millar DS, Paul CL, Warnecke PM, Harrison J, Vincent PC, Frommer M, Clark SJ. Stirzaker C, et al. Among authors: clark sj. Cancer Res. 1997 Jun 1;57(11):2229-37. Cancer Res. 1997. PMID: 9187126

3

Detection and measurement of PCR bias in quantitative methylation analysis of bisulphite-treated DNA.

Warnecke PM, Stirzaker C, Melki JR, Millar DS, Paul CL, Clark SJ. Warnecke PM, et al. Among authors: clark sj. Nucleic Acids Res. 1997 Nov 1;25(21):4422-6. doi: 10.1093/nar/25.21.4422. Nucleic Acids Res. 1997. PMID: 9336479 Free PMC article.

4

Cytosines adjacent to methylated CpG sites can be partially resistant to conversion in genomic bisulfite sequencing leading to methylation artifacts.

Harrison J, Stirzaker C, Clark SJ. Harrison J, et al. Among authors: clark sj. Anal Biochem. 1998 Nov 1;264(1):129-32. doi: 10.1006/abio.1998.2833. Anal Biochem. 1998. PMID: 9784198 No abstract available.

5

Hypermethylation trigger of the glutathione-S-transferase gene (GSTP1) in prostate cancer cells.

Song JZ, Stirzaker C, Harrison J, Melki JR, Clark SJ. Song JZ, et al. Among authors: clark sj. Oncogene. 2002 Feb 7;21(7):1048-61. doi: 10.1038/sj.onc.1205153. Oncogene. 2002. PMID: 11850822

6

Identification and resolution of artifacts in bisulfite sequencing.

Warnecke PM, Stirzaker C, Song J, Grunau C, Melki JR, Clark SJ. Warnecke PM, et al. Among authors: clark sj. Methods. 2002 Jun;27(2):101-7. doi: 10.1016/s1046-2023(02)00060-9. Methods. 2002. PMID: 12095266

7

Conversion-specific detection of DNA methylation using real-time polymerase chain reaction (ConLight-MSP) to avoid false positives.

Rand K, Qu W, Ho T, Clark SJ, Molloy P. Rand K, et al. Among authors: clark sj. Methods. 2002 Jun;27(2):114-20. doi: 10.1016/s1046-2023(02)00062-2. Methods. 2002. PMID: 12095268

8

Transcriptional gene silencing promotes DNA hypermethylation through a sequential change in chromatin modifications in cancer cells.

Stirzaker C, Song JZ, Davidson B, Clark SJ. Stirzaker C, et al. Among authors: clark sj. Cancer Res. 2004 Jun 1;64(11):3871-7. doi: 10.1158/0008-5472.CAN-03-3690. Cancer Res. 2004. PMID: 15172996

9

Headloop suppression PCR and its application to selective amplification of methylated DNA sequences.

Rand KN, Ho T, Qu W, Mitchell SM, White R, Clark SJ, Molloy PL. Rand KN, et al. Among authors: clark sj. Nucleic Acids Res. 2005 Aug 9;33(14):e127. doi: 10.1093/nar/gni120. Nucleic Acids Res. 2005. PMID: 16091627 Free PMC article.

10

Permissive transcriptional activity at the centromere through pockets of DNA hypomethylation.

Wong NC, Wong LH, Quach JM, Canham P, Craig JM, Song JZ, Clark SJ, Choo KH. Wong NC, et al. Among authors: clark sj. PLoS Genet. 2006 Feb;2(2):e17. doi: 10.1371/journal.pgen.0020017. Epub 2006 Feb 10. PLoS Genet. 2006. PMID: 16477312 Free PMC article.

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