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Investigating higher-order interactions in single-cell data with scHOT.
Ghazanfar S, Lin Y, Su X, Lin DM, Patrick E, Han ZG, Marioni JC, Yang JYH. Ghazanfar S, et al. Among authors: patrick e. Nat Methods. 2020 Aug;17(8):799-806. doi: 10.1038/s41592-020-0885-x. Epub 2020 Jul 13. Nat Methods. 2020. PMID: 32661426 Free PMC article.
DCARS: differential correlation across ranked samples.
Ghazanfar S, Strbenac D, Ormerod JT, Yang JYH, Patrick E. Ghazanfar S, et al. Among authors: patrick e. Bioinformatics. 2019 Mar 1;35(5):823-829. doi: 10.1093/bioinformatics/bty698. Bioinformatics. 2019. PMID: 30102408
Evaluating stably expressed genes in single cells.
Lin Y, Ghazanfar S, Strbenac D, Wang A, Patrick E, Lin DM, Speed T, Yang JYH, Yang P. Lin Y, et al. Among authors: patrick e. Gigascience. 2019 Sep 1;8(9):giz106. doi: 10.1093/gigascience/giz106. Gigascience. 2019. PMID: 31531674 Free PMC article.
199 results