Basu S - Search Results

1

Metabolic coessentiality mapping identifies C12orf49 as a regulator of SREBP processing and cholesterol metabolism.

Bayraktar EC, La K, Karpman K, Unlu G, Ozerdem C, Ritter DJ, Alwaseem H, Molina H, Hoffmann HH, Millner A, Atilla-Gokcumen GE, Gamazon ER, Rushing AR, Knapik EW, Basu S, Birsoy K. Bayraktar EC, et al. Among authors: basu s. Nat Metab. 2020 Jun;2(6):487-498. doi: 10.1038/s42255-020-0206-9. Epub 2020 Jun 1. Nat Metab. 2020. PMID: 32694732 Free PMC article.

2

Learning Financial Networks with High-frequency Trade Data.

Karpman K, Basu S, Easley D, Kim S. Karpman K, et al. Among authors: basu s. Data Sci Sci. 2023;2(1):2166624. doi: 10.1080/26941899.2023.2166624. Epub 2023 Feb 28. Data Sci Sci. 2023. PMID: 38249160 Free PMC article.

3

Dense time-course gene expression profiling of the Drosophila melanogaster innate immune response.

Schlamp F, Delbare SYN, Early AM, Wells MT, Basu S, Clark AG. Schlamp F, et al. Among authors: basu s. BMC Genomics. 2021 Apr 26;22(1):304. doi: 10.1186/s12864-021-07593-3. BMC Genomics. 2021. PMID: 33902461 Free PMC article.

4

Time series transcriptome analysis implicates the circadian clock in the Drosophila melanogaster female's response to sex peptide.

Delbare SYN, Venkatraman S, Scuderi K, Wells MT, Wolfner MF, Basu S, Clark AG. Delbare SYN, et al. Among authors: basu s. Proc Natl Acad Sci U S A. 2023 Jan 31;120(5):e2214883120. doi: 10.1073/pnas.2214883120. Epub 2023 Jan 27. Proc Natl Acad Sci U S A. 2023. PMID: 36706221 Free PMC article.

5

Iterative random forests to discover predictive and stable high-order interactions.

Basu S, Kumbier K, Brown JB, Yu B. Basu S, et al. Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):1943-1948. doi: 10.1073/pnas.1711236115. Epub 2018 Jan 19. Proc Natl Acad Sci U S A. 2018. PMID: 29351989 Free PMC article.

6

Sparse Identification and Estimation of Large-Scale Vector AutoRegressive Moving Averages.

Wilms I, Basu S, Bien J, Matteson DS. Wilms I, et al. Among authors: basu s. J Am Stat Assoc. 2023;118(541):571-582. doi: 10.1080/01621459.2021.1942013. Epub 2021 Aug 9. J Am Stat Assoc. 2023. PMID: 37346226 Free PMC article.

7

Syndromic Surveillance Tracks COVID-19 Cases in University and County Settings: Retrospective Observational Study.

Wass LM, O'Keeffe Hoare D, Smits GE, Osman M, Zhang N, Klepack W, Parrilla L, Busche JM, Clarkberg ME, Basu S, Cazer CL. Wass LM, et al. Among authors: basu s. JMIR Public Health Surveill. 2024 Jun 27;10:e54551. doi: 10.2196/54551. JMIR Public Health Surveill. 2024. PMID: 38952000 Free PMC article.

8

RandomForestsGLS: An R package for Random Forests for dependent data.

Saha A, Basu S, Datta A. Saha A, et al. Among authors: basu s. J Open Source Softw. 2022;7(71):3780. doi: 10.21105/joss.03780. Epub 2022 Feb 25. J Open Source Softw. 2022. PMID: 37077317 Free PMC article.

9

Triphenylamine-Naphthalimide-Based "On-Off-On" AIEgen for Imaging Golgi Apparatus and Endoplasmic Reticulum.

Kumar P, Mishra T, Sanyam, Mondal A, Basu S. Kumar P, et al. Among authors: basu s. ACS Appl Bio Mater. 2025 Jan 21. doi: 10.1021/acsabm.4c01722. Online ahead of print. ACS Appl Bio Mater. 2025. PMID: 39835412

10

Twenty years of advances in prediction of nucleic acid-binding residues in protein sequences.

Basu S, Yu J, Kihara D, Kurgan L. Basu S, et al. Brief Bioinform. 2024 Nov 22;26(1):bbaf016. doi: 10.1093/bib/bbaf016. Brief Bioinform. 2024. PMID: 39833102 Review.

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