Li J - Search Results

1

Long-read-based human genomic structural variation detection with cuteSV.

Jiang T, Liu Y, Jiang Y, Li J, Gao Y, Cui Z, Liu Y, Liu B, Wang Y. Jiang T, et al. Among authors: li j. Genome Biol. 2020 Aug 3;21(1):189. doi: 10.1186/s13059-020-02107-y. Genome Biol. 2020. PMID: 32746918 Free PMC article.

2

rMFilter: acceleration of long read-based structure variation calling by chimeric read filtering.

Liu B, Jiang T, Yiu SM, Li J, Wang Y. Liu B, et al. Among authors: li j. Bioinformatics. 2017 Sep 1;33(17):2750-2752. doi: 10.1093/bioinformatics/btx279. Bioinformatics. 2017. PMID: 28482046

3

BdBG: a bucket-based method for compressing genome sequencing data with dynamic de Bruijn graphs.

Wang R, Li J, Bai Y, Zang T, Wang Y. Wang R, et al. Among authors: li j. PeerJ. 2018 Oct 19;6:e5611. doi: 10.7717/peerj.5611. eCollection 2018. PeerJ. 2018. PMID: 30364599 Free PMC article.

4

rMETL: sensitive mobile element insertion detection with long read realignment.

Jiang T, Liu B, Li J, Wang Y. Jiang T, et al. Among authors: li j. Bioinformatics. 2019 Sep 15;35(18):3484-3486. doi: 10.1093/bioinformatics/btz106. Bioinformatics. 2019. PMID: 30759188

5

deGSM: Memory Scalable Construction Of Large Scale de Bruijn Graph.

Guo H, Fu Y, Gao Y, Li J, Wang Y, Liu B. Guo H, et al. Among authors: li j. IEEE/ACM Trans Comput Biol Bioinform. 2021 Nov-Dec;18(6):2157-2166. doi: 10.1109/TCBB.2019.2913932. Epub 2021 Dec 8. IEEE/ACM Trans Comput Biol Bioinform. 2021. PMID: 31056509

6

Integrated entropy-based approach for analyzing exons and introns in DNA sequences.

Li J, Zhang L, Li H, Ping Y, Xu Q, Wang R, Tan R, Wang Z, Liu B, Wang Y. Li J, et al. Among authors: li h. BMC Bioinformatics. 2019 Jun 10;20(Suppl 8):283. doi: 10.1186/s12859-019-2772-y. BMC Bioinformatics. 2019. PMID: 31182012 Free PMC article.

7

deSALT: fast and accurate long transcriptomic read alignment with de Bruijn graph-based index.

Liu B, Liu Y, Li J, Guo H, Zang T, Wang Y. Liu B, et al. Among authors: li j. Genome Biol. 2019 Dec 16;20(1):274. doi: 10.1186/s13059-019-1895-9. Genome Biol. 2019. PMID: 31842925 Free PMC article.

8

Prognostic prediction of carcinoma by a differential-regulatory-network-embedded deep neural network.

Li J, Ping Y, Li H, Li H, Liu Y, Liu B, Wang Y. Li J, et al. Among authors: li h. Comput Biol Chem. 2020 Oct;88:107317. doi: 10.1016/j.compbiolchem.2020.107317. Epub 2020 Jun 24. Comput Biol Chem. 2020. PMID: 32622180

9

Pan-Cancer Classification Based on Self-Normalizing Neural Networks and Feature Selection.

Li J, Xu Q, Wu M, Huang T, Wang Y. Li J, et al. Front Bioeng Biotechnol. 2020 Aug 4;8:766. doi: 10.3389/fbioe.2020.00766. eCollection 2020. Front Bioeng Biotechnol. 2020. PMID: 32850695 Free PMC article.

10

ScGSLC: An unsupervised graph similarity learning framework for single-cell RNA-seq data clustering.

Li J, Jiang W, Han H, Liu J, Liu B, Wang Y. Li J, et al. Comput Biol Chem. 2021 Feb;90:107415. doi: 10.1016/j.compbiolchem.2020.107415. Epub 2020 Nov 18. Comput Biol Chem. 2021. PMID: 33307360

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