Marks DS - Search Results

1

Multiplexed measurement of variant abundance and activity reveals VKOR topology, active site and human variant impact.

Chiasson MA, Rollins NJ, Stephany JJ, Sitko KA, Matreyek KA, Verby M, Sun S, Roth FP, DeSloover D, Marks DS, Rettie AE, Fowler DM. Chiasson MA, et al. Among authors: marks ds. Elife. 2020 Sep 1;9:e58026. doi: 10.7554/eLife.58026. Elife. 2020. PMID: 32870157 Free PMC article.

2

Antiparallel protocadherin homodimers use distinct affinity- and specificity-mediating regions in cadherin repeats 1-4.

Nicoludis JM, Vogt BE, Green AG, Schärfe CP, Marks DS, Gaudet R. Nicoludis JM, et al. Among authors: marks ds. Elife. 2016 Jul 29;5:e18449. doi: 10.7554/eLife.18449. Elife. 2016. PMID: 27472898 Free PMC article.

3

Inferring protein 3D structure from deep mutation scans.

Rollins NJ, Brock KP, Poelwijk FJ, Stiffler MA, Gauthier NP, Sander C, Marks DS. Rollins NJ, et al. Among authors: marks ds. Nat Genet. 2019 Jul;51(7):1170-1176. doi: 10.1038/s41588-019-0432-9. Epub 2019 Jun 17. Nat Genet. 2019. PMID: 31209393 Free PMC article.

4

Natural and Designed Proteins Inspired by Extremotolerant Organisms Can Form Condensates and Attenuate Apoptosis in Human Cells.

Veling MT, Nguyen DT, Thadani NN, Oster ME, Rollins NJ, Brock KP, Bethel NP, Lim S, Baker D, Way JC, Marks DS, Chang RL, Silver PA. Veling MT, et al. Among authors: marks ds. ACS Synth Biol. 2022 Mar 18;11(3):1292-1302. doi: 10.1021/acssynbio.1c00572. Epub 2022 Feb 18. ACS Synth Biol. 2022. PMID: 35176859 Free PMC article.

5

High-Content Screening and Computational Prediction Reveal Viral Genes That Suppress the Innate Immune Response.

Ng TL, Olson EJ, Yoo TY, Weiss HS, Koide Y, Koch PD, Rollins NJ, Mach P, Meisinger T, Bricken T, Chang TZ, Molloy C, Zürcher J, Chang RL, Mitchison TJ, Glass JI, Marks DS, Way JC, Silver PA. Ng TL, et al. Among authors: marks ds. mSystems. 2022 Apr 26;7(2):e0146621. doi: 10.1128/msystems.01466-21. Epub 2022 Mar 23. mSystems. 2022. PMID: 35319251 Free PMC article.

6

An Atlas of Variant Effects to understand the genome at nucleotide resolution.

Fowler DM, Adams DJ, Gloyn AL, Hahn WC, Marks DS, Muffley LA, Neal JT, Roth FP, Rubin AF, Starita LM, Hurles ME. Fowler DM, et al. Among authors: marks ds. Genome Biol. 2023 Jul 3;24(1):147. doi: 10.1186/s13059-023-02986-x. Genome Biol. 2023. PMID: 37394429 Free PMC article.

7

Learning from prepandemic data to forecast viral escape.

Thadani NN, Gurev S, Notin P, Youssef N, Rollins NJ, Ritter D, Sander C, Gal Y, Marks DS. Thadani NN, et al. Among authors: marks ds. Nature. 2023 Oct;622(7984):818-825. doi: 10.1038/s41586-023-06617-0. Epub 2023 Oct 11. Nature. 2023. PMID: 37821700 Free PMC article.

8

Machine learning for functional protein design.

Notin P, Rollins N, Gal Y, Sander C, Marks D. Notin P, et al. Nat Biotechnol. 2024 Feb;42(2):216-228. doi: 10.1038/s41587-024-02127-0. Epub 2024 Feb 15. Nat Biotechnol. 2024. PMID: 38361074 Review.

9

Protein design using structure-based residue preferences.

Ding D, Shaw AY, Sinai S, Rollins N, Prywes N, Savage DF, Laub MT, Marks DS. Ding D, et al. Among authors: marks ds. Nat Commun. 2024 Feb 22;15(1):1639. doi: 10.1038/s41467-024-45621-4. Nat Commun. 2024. PMID: 38388493 Free PMC article.

10

Sequence co-evolution gives 3D contacts and structures of protein complexes.

Hopf TA, Schärfe CP, Rodrigues JP, Green AG, Kohlbacher O, Sander C, Bonvin AM, Marks DS. Hopf TA, et al. Among authors: marks ds. Elife. 2014 Sep 25;3:e03430. doi: 10.7554/eLife.03430. Elife. 2014. PMID: 25255213 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

164 results

Search Page

Filters