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Multiplex Immunofluorescence in Formalin-Fixed Paraffin-Embedded Tumor Tissue to Identify Single-Cell-Level PI3K Pathway Activation.
Stopsack KH, Huang Y, Tyekucheva S, Gerke TA, Bango C, Elfandy H, Bowden M, Penney KL, Roberts TM, Parmigiani G, Kantoff PW, Mucci LA, Loda M. Stopsack KH, et al. Among authors: parmigiani g. Clin Cancer Res. 2020 Nov 15;26(22):5903-5913. doi: 10.1158/1078-0432.CCR-20-2000. Epub 2020 Sep 10. Clin Cancer Res. 2020. PMID: 32913135 Free PMC article.
Integrating diverse genomic data using gene sets.
Tyekucheva S, Marchionni L, Karchin R, Parmigiani G. Tyekucheva S, et al. Among authors: parmigiani g. Genome Biol. 2011 Oct 21;12(10):R105. doi: 10.1186/gb-2011-12-10-r105. Genome Biol. 2011. PMID: 22018358 Free PMC article.
Expression profiling of archival tumors for long-term health studies.
Waldron L, Ogino S, Hoshida Y, Shima K, McCart Reed AE, Simpson PT, Baba Y, Nosho K, Segata N, Vargas AC, Cummings MC, Lakhani SR, Kirkner GJ, Giovannucci E, Quackenbush J, Golub TR, Fuchs CS, Parmigiani G, Huttenhower C. Waldron L, et al. Among authors: parmigiani g. Clin Cancer Res. 2012 Nov 15;18(22):6136-46. doi: 10.1158/1078-0432.CCR-12-1915. Epub 2012 Nov 7. Clin Cancer Res. 2012. PMID: 23136189 Free PMC article.
curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome.
Ganzfried BF, Riester M, Haibe-Kains B, Risch T, Tyekucheva S, Jazic I, Wang XV, Ahmadifar M, Birrer MJ, Parmigiani G, Huttenhower C, Waldron L. Ganzfried BF, et al. Among authors: parmigiani g. Database (Oxford). 2013 Apr 2;2013:bat013. doi: 10.1093/database/bat013. Print 2013. Database (Oxford). 2013. PMID: 23550061 Free PMC article.
Comparative meta-analysis of prognostic gene signatures for late-stage ovarian cancer.
Waldron L, Haibe-Kains B, Culhane AC, Riester M, Ding J, Wang XV, Ahmadifar M, Tyekucheva S, Bernau C, Risch T, Ganzfried BF, Huttenhower C, Birrer M, Parmigiani G. Waldron L, et al. Among authors: parmigiani g. J Natl Cancer Inst. 2014 Apr 3;106(5):dju049. doi: 10.1093/jnci/dju049. J Natl Cancer Inst. 2014. PMID: 24700801 Free PMC article. Review.
Familial Risk and Heritability of Cancer Among Twins in Nordic Countries.
Mucci LA, Hjelmborg JB, Harris JR, Czene K, Havelick DJ, Scheike T, Graff RE, Holst K, Möller S, Unger RH, McIntosh C, Nuttall E, Brandt I, Penney KL, Hartman M, Kraft P, Parmigiani G, Christensen K, Koskenvuo M, Holm NV, Heikkilä K, Pukkala E, Skytthe A, Adami HO, Kaprio J; Nordic Twin Study of Cancer (NorTwinCan) Collaboration. Mucci LA, et al. Among authors: parmigiani g. JAMA. 2016 Jan 5;315(1):68-76. doi: 10.1001/jama.2015.17703. JAMA. 2016. PMID: 26746459 Free PMC article.
Stromal and epithelial transcriptional map of initiation progression and metastatic potential of human prostate cancer.
Tyekucheva S, Bowden M, Bango C, Giunchi F, Huang Y, Zhou C, Bondi A, Lis R, Van Hemelrijck M, Andrén O, Andersson SO, Watson RW, Pennington S, Finn SP, Martin NE, Stampfer MJ, Parmigiani G, Penney KL, Fiorentino M, Mucci LA, Loda M. Tyekucheva S, et al. Among authors: parmigiani g. Nat Commun. 2017 Sep 4;8(1):420. doi: 10.1038/s41467-017-00460-4. Nat Commun. 2017. PMID: 28871082 Free PMC article.
292 results