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Page 1
The Prognostic Role of Macrophage Polarization in the Colorectal Cancer Microenvironment.
Väyrynen JP, Haruki K, Lau MC, Väyrynen SA, Zhong R, Dias Costa A, Borowsky J, Zhao M, Fujiyoshi K, Arima K, Twombly TS, Kishikawa J, Gu S, Aminmozaffari S, Shi S, Baba Y, Akimoto N, Ugai T, Da Silva A, Guerriero JL, Song M, Wu K, Chan AT, Nishihara R, Fuchs CS, Meyerhardt JA, Giannakis M, Ogino S, Nowak JA. Väyrynen JP, et al. Among authors: dias costa a. Cancer Immunol Res. 2021 Jan;9(1):8-19. doi: 10.1158/2326-6066.CIR-20-0527. Epub 2020 Oct 6. Cancer Immunol Res. 2021. PMID: 33023967 Free PMC article.
An integrated analysis of lymphocytic reaction, tumour molecular characteristics and patient survival in colorectal cancer.
Haruki K, Kosumi K, Li P, Arima K, Väyrynen JP, Lau MC, Twombly TS, Hamada T, Glickman JN, Fujiyoshi K, Chen Y, Du C, Guo C, Väyrynen SA, Dias Costa A, Song M, Chan AT, Meyerhardt JA, Nishihara R, Fuchs CS, Liu L, Zhang X, Wu K, Giannakis M, Nowak JA, Ogino S. Haruki K, et al. Among authors: dias costa a. Br J Cancer. 2020 Apr;122(9):1367-1377. doi: 10.1038/s41416-020-0780-3. Epub 2020 Mar 11. Br J Cancer. 2020. PMID: 32157241 Free PMC article.
Prognostic Significance of Immune Cell Populations Identified by Machine Learning in Colorectal Cancer Using Routine Hematoxylin and Eosin-Stained Sections.
Väyrynen JP, Lau MC, Haruki K, Väyrynen SA, Dias Costa A, Borowsky J, Zhao M, Fujiyoshi K, Arima K, Twombly TS, Kishikawa J, Gu S, Aminmozaffari S, Shi S, Baba Y, Akimoto N, Ugai T, Da Silva A, Song M, Wu K, Chan AT, Nishihara R, Fuchs CS, Meyerhardt JA, Giannakis M, Ogino S, Nowak JA. Väyrynen JP, et al. Among authors: dias costa a. Clin Cancer Res. 2020 Aug 15;26(16):4326-4338. doi: 10.1158/1078-0432.CCR-20-0071. Epub 2020 May 21. Clin Cancer Res. 2020. PMID: 32439699 Free PMC article.
Composition, Spatial Characteristics, and Prognostic Significance of Myeloid Cell Infiltration in Pancreatic Cancer.
Väyrynen SA, Zhang J, Yuan C, Väyrynen JP, Dias Costa A, Williams H, Morales-Oyarvide V, Lau MC, Rubinson DA, Dunne RF, Kozak MM, Wang W, Agostini-Vulaj D, Drage MG, Brais L, Reilly E, Rahma O, Clancy T, Wang J, Linehan DC, Aguirre AJ, Fuchs CS, Coussens LM, Chang DT, Koong AC, Hezel AF, Ogino S, Nowak JA, Wolpin BM. Väyrynen SA, et al. Among authors: dias costa a. Clin Cancer Res. 2021 Feb 15;27(4):1069-1081. doi: 10.1158/1078-0432.CCR-20-3141. Epub 2020 Dec 1. Clin Cancer Res. 2021. PMID: 33262135 Free PMC article.
Association of Fusobacterium nucleatum with Specific T-cell Subsets in the Colorectal Carcinoma Microenvironment.
Borowsky J, Haruki K, Lau MC, Dias Costa A, Väyrynen JP, Ugai T, Arima K, da Silva A, Felt KD, Zhao M, Gurjao C, Twombly TS, Fujiyoshi K, Väyrynen SA, Hamada T, Mima K, Bullman S, Harrison TA, Phipps AI, Peters U, Ng K, Meyerhardt JA, Song M, Giovannucci EL, Wu K, Zhang X, Freeman GJ, Huttenhower C, Garrett WS, Chan AT, Leggett BA, Whitehall VLJ, Walker N, Brown I, Bettington M, Nishihara R, Fuchs CS, Lennerz JK, Giannakis M, Nowak JA, Ogino S. Borowsky J, et al. Among authors: dias costa a. Clin Cancer Res. 2021 May 15;27(10):2816-2826. doi: 10.1158/1078-0432.CCR-20-4009. Epub 2021 Feb 25. Clin Cancer Res. 2021. PMID: 33632927 Free PMC article.
Prognostic significance of myeloid immune cells and their spatial distribution in the colorectal cancer microenvironment.
Väyrynen JP, Haruki K, Väyrynen SA, Lau MC, Dias Costa A, Borowsky J, Zhao M, Ugai T, Kishikawa J, Akimoto N, Zhong R, Shi S, Chang TW, Fujiyoshi K, Arima K, Twombly TS, Da Silva A, Song M, Wu K, Zhang X, Chan AT, Nishihara R, Fuchs CS, Meyerhardt JA, Giannakis M, Ogino S, Nowak JA. Väyrynen JP, et al. Among authors: dias costa a. J Immunother Cancer. 2021 Apr;9(4):e002297. doi: 10.1136/jitc-2020-002297. J Immunother Cancer. 2021. PMID: 33931472 Free PMC article.
Smoking and Incidence of Colorectal Cancer Subclassified by Tumor-Associated Macrophage Infiltrates.
Ugai T, Väyrynen JP, Haruki K, Akimoto N, Lau MC, Zhong R, Kishikawa J, Väyrynen SA, Zhao M, Fujiyoshi K, Dias Costa A, Borowsky J, Arima K, Guerriero JL, Fuchs CS, Zhang X, Song M, Wang M, Giannakis M, Meyerhardt JA, Nowak JA, Ogino S. Ugai T, et al. Among authors: dias costa a. J Natl Cancer Inst. 2022 Jan 11;114(1):68-77. doi: 10.1093/jnci/djab142. J Natl Cancer Inst. 2022. PMID: 34264325 Free PMC article.
Immune cell profiles in the tumor microenvironment of early-onset, intermediate-onset, and later-onset colorectal cancer.
Ugai T, Väyrynen JP, Lau MC, Borowsky J, Akimoto N, Väyrynen SA, Zhao M, Zhong R, Haruki K, Dias Costa A, Fujiyoshi K, Arima K, Wu K, Chan AT, Cao Y, Song M, Fuchs CS, Wang M, Lennerz JK, Ng K, Meyerhardt JA, Giannakis M, Nowak JA, Ogino S. Ugai T, et al. Among authors: dias costa a. Cancer Immunol Immunother. 2022 Apr;71(4):933-942. doi: 10.1007/s00262-021-03056-6. Epub 2021 Sep 16. Cancer Immunol Immunother. 2022. PMID: 34529108 Free PMC article.
Spatial Organization and Prognostic Significance of NK and NKT-like Cells via Multimarker Analysis of the Colorectal Cancer Microenvironment.
Väyrynen JP, Haruki K, Lau MC, Väyrynen SA, Ugai T, Akimoto N, Zhong R, Zhao M, Dias Costa A, Borowsky J, Bell P, Takashima Y, Fujiyoshi K, Arima K, Kishikawa J, Shi SS, Twombly TS, Song M, Wu K, Chan AT, Zhang X, Fuchs CS, Meyerhardt JA, Giannakis M, Ogino S, Nowak JA. Väyrynen JP, et al. Among authors: dias costa a. Cancer Immunol Res. 2022 Feb;10(2):215-227. doi: 10.1158/2326-6066.CIR-21-0772. Epub 2021 Dec 22. Cancer Immunol Res. 2022. PMID: 34937729 Free PMC article.
Insulin-Like Growth Factor-1 Receptor Expression and Disease Recurrence and Survival in Patients with Resected Pancreatic Ductal Adenocarcinoma.
Du C, da Silva A, Morales-Oyarvide V, Dias Costa A, Kozak MM, Dunne RF, Rubinson DA, Perez K, Masugi Y, Hamada T, Brais LK, Yuan C, Babic A, Ducar MD, Thorner AR, Aguirre A, Kulke MH, Ng K, Clancy TE, Findeis-Hosey JJ, Chang DT, Hornick JL, Fuchs CS, Ogino S, Koong AC, Hezel AF, Wolpin BM, Nowak JA. Du C, et al. Among authors: dias costa a. Cancer Epidemiol Biomarkers Prev. 2020 Aug;29(8):1586-1595. doi: 10.1158/1055-9965.EPI-19-1315. Epub 2020 May 28. Cancer Epidemiol Biomarkers Prev. 2020. PMID: 32467349 Free PMC article.
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