Lemoine F - Search Results

1

COVID-Align: accurate online alignment of hCoV-19 genomes using a profile HMM.

Lemoine F, Blassel L, Voznica J, Gascuel O. Lemoine F, et al. Bioinformatics. 2021 Jul 19;37(12):1761-1762. doi: 10.1093/bioinformatics/btaa871. Bioinformatics. 2021. PMID: 33045068 Free PMC article.

2

Renewing Felsenstein's phylogenetic bootstrap in the era of big data.

Lemoine F, Domelevo Entfellner JB, Wilkinson E, Correia D, Dávila Felipe M, De Oliveira T, Gascuel O. Lemoine F, et al. Nature. 2018 Apr;556(7702):452-456. doi: 10.1038/s41586-018-0043-0. Epub 2018 Apr 18. Nature. 2018. PMID: 29670290 Free PMC article.

3

NGPhylogeny.fr: new generation phylogenetic services for non-specialists.

Lemoine F, Correia D, Lefort V, Doppelt-Azeroual O, Mareuil F, Cohen-Boulakia S, Gascuel O. Lemoine F, et al. Nucleic Acids Res. 2019 Jul 2;47(W1):W260-W265. doi: 10.1093/nar/gkz303. Nucleic Acids Res. 2019. PMID: 31028399 Free PMC article.

4

Distribution and asymptotic behavior of the phylogenetic transfer distance.

Dávila Felipe M, Domelevo Entfellner JB, Lemoine F, Truszkowski J, Gascuel O. Dávila Felipe M, et al. Among authors: lemoine f. J Math Biol. 2019 Jul;79(2):485-508. doi: 10.1007/s00285-019-01365-0. Epub 2019 Apr 29. J Math Biol. 2019. PMID: 31037350 Free PMC article.

5

SpliceLauncher: a tool for detection, annotation and relative quantification of alternative junctions from RNAseq data.

Leman R, Harter V, Atkinson A, Davy G, Rousselin A, Muller E, Castéra L, Lemoine F, de la Grange P, Guillaud-Bataille M, Vaur D, Krieger S. Leman R, et al. Among authors: lemoine f. Bioinformatics. 2020 Mar 1;36(5):1634-1636. doi: 10.1093/bioinformatics/btz784. Bioinformatics. 2020. PMID: 31617569

6

Differing impacts of global and regional responses on SARS-CoV-2 transmission cluster dynamics.

Magalis BR, Ramirez-Mata A, Zhukova A, Mavian C, Marini S, Lemoine F, Prosperi M, Gascuel O, Salemi M. Magalis BR, et al. Among authors: lemoine f. bioRxiv [Preprint]. 2020 Nov 6:2020.11.06.370999. doi: 10.1101/2020.11.06.370999. bioRxiv. 2020. PMID: 33173870 Free PMC article. Preprint.

7

Origin, evolution and global spread of SARS-CoV-2.

Zhukova A, Blassel L, Lemoine F, Morel M, Voznica J, Gascuel O. Zhukova A, et al. Among authors: lemoine f. C R Biol. 2020 Nov 24. doi: 10.5802/crbiol.29. Online ahead of print. C R Biol. 2020. PMID: 33274614 Free article. Review.

8

Gotree/Goalign: toolkit and Go API to facilitate the development of phylogenetic workflows.

Lemoine F, Gascuel O. Lemoine F, et al. NAR Genom Bioinform. 2021 Aug 11;3(3):lqab075. doi: 10.1093/nargab/lqab075. eCollection 2021 Sep. NAR Genom Bioinform. 2021. PMID: 34396097 Free PMC article.

9

Correction to 'Gotree/Goalign: toolkit and Go API to facilitate the development of phylogenetic workflows'.

Lemoine F, Gascuel O. Lemoine F, et al. NAR Genom Bioinform. 2021 Sep 10;3(3):lqab083. doi: 10.1093/nargab/lqab083. eCollection 2021 Sep. NAR Genom Bioinform. 2021. PMID: 34522882 Free PMC article.

10

Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks.

Voznica J, Zhukova A, Boskova V, Saulnier E, Lemoine F, Moslonka-Lefebvre M, Gascuel O. Voznica J, et al. Among authors: lemoine f. Nat Commun. 2022 Jul 6;13(1):3896. doi: 10.1038/s41467-022-31511-0. Nat Commun. 2022. PMID: 35794110 Free PMC article.

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