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Amplicon-Based Detection and Sequencing of SARS-CoV-2 in Nasopharyngeal Swabs from Patients With COVID-19 and Identification of Deletions in the Viral Genome That Encode Proteins Involved in Interferon Antagonism.
Moore SC, Penrice-Randal R, Alruwaili M, Randle N, Armstrong S, Hartley C, Haldenby S, Dong X, Alrezaihi A, Almsaud M, Bentley E, Clark J, García-Dorival I, Gilmore P, Han X, Jones B, Luu L, Sharma P, Shawli G, Sun Y, Zhao Q, Pullan ST, Carter DP, Bewley K, Dunning J, Zhou EM, Solomon T, Beadsworth M, Cruise J, Crook DW, Matthews DA, Davidson AD, Mahmood Z, Aljabr W, Druce J, Vipond R, Ng L, Renia L, Openshaw PJM, Baillie JK, Carroll MW, Stewart J, Darby A, Semple M, Turtle L, Hiscox JA. Moore SC, et al. Among authors: carter dp. Viruses. 2020 Oct 14;12(10):1164. doi: 10.3390/v12101164. Viruses. 2020. PMID: 33066701 Free PMC article.
Diagnosis of SARS-CoV-2 Infection with LamPORE, a High-Throughput Platform Combining Loop-Mediated Isothermal Amplification and Nanopore Sequencing.
Peto L, Rodger G, Carter DP, Osman KL, Yavuz M, Johnson K, Raza M, Parker MD, Wyles MD, Andersson M, Justice A, Vaughan A, Hoosdally S, Stoesser N, Matthews PC, Eyre DW, Peto TEA, Carroll MW, de Silva TI, Crook DW, Evans CM, Pullan ST. Peto L, et al. Among authors: carter dp. J Clin Microbiol. 2021 May 19;59(6):e03271-20. doi: 10.1128/JCM.03271-20. Print 2021 May 19. J Clin Microbiol. 2021. PMID: 33782112 Free PMC article.
Dose-dependent response to infection with SARS-CoV-2 in the ferret model and evidence of protective immunity.
Ryan KA, Bewley KR, Fotheringham SA, Slack GS, Brown P, Hall Y, Wand NI, Marriott AC, Cavell BE, Tree JA, Allen L, Aram MJ, Bean TJ, Brunt E, Buttigieg KR, Carter DP, Cobb R, Coombes NS, Findlay-Wilson SJ, Godwin KJ, Gooch KE, Gouriet J, Halkerston R, Harris DJ, Hender TH, Humphries HE, Hunter L, Ho CMK, Kennard CL, Leung S, Longet S, Ngabo D, Osman KL, Paterson J, Penn EJ, Pullan ST, Rayner E, Skinner O, Steeds K, Taylor I, Tipton T, Thomas S, Turner C, Watson RJ, Wiblin NR, Charlton S, Hallis B, Hiscox JA, Funnell S, Dennis MJ, Whittaker CJ, Catton MG, Druce J, Salguero FJ, Carroll MW. Ryan KA, et al. Among authors: carter dp. Nat Commun. 2021 Jan 4;12(1):81. doi: 10.1038/s41467-020-20439-y. Nat Commun. 2021. PMID: 33398055 Free PMC article.
Assessment of metagenomic Nanopore and Illumina sequencing for recovering whole genome sequences of chikungunya and dengue viruses directly from clinical samples.
Kafetzopoulou LE, Efthymiadis K, Lewandowski K, Crook A, Carter D, Osborne J, Aarons E, Hewson R, Hiscox JA, Carroll MW, Vipond R, Pullan ST. Kafetzopoulou LE, et al. Euro Surveill. 2018 Dec;23(50):1800228. doi: 10.2807/1560-7917.ES.2018.23.50.1800228. Euro Surveill. 2018. PMID: 30563591 Free PMC article.
Tick-Borne Encephalitis Virus, United Kingdom.
Holding M, Dowall SD, Medlock JM, Carter DP, Pullan ST, Lewis J, Vipond R, Rocchi MS, Baylis M, Hewson R. Holding M, et al. Among authors: carter dp. Emerg Infect Dis. 2020 Jan;26(1):90-96. doi: 10.3201/eid2601.191085. Epub 2020 Jan 17. Emerg Infect Dis. 2020. PMID: 31661056 Free PMC article.
Detection of Crimean-Congo Haemorrhagic Fever cases in a severe undifferentiated febrile illness outbreak in the Federal Republic of Sudan: A retrospective epidemiological and diagnostic cohort study.
Bower H, El Karsany M, Alzain M, Gannon B, Mohamed R, Mahmoud I, Eldegail M, Taha R, Osman A, Mohamednour S, Semper A, Atkinson B, Carter D, Dowall S, Furneaux J, Graham V, Mellors J, Osborne J, Pullan ST, Slack GS, Brooks T, Hewson R, Beeching NJ, Whitworth J, Bausch DG, Fletcher TE. Bower H, et al. PLoS Negl Trop Dis. 2019 Jul 10;13(7):e0007571. doi: 10.1371/journal.pntd.0007571. eCollection 2019 Jul. PLoS Negl Trop Dis. 2019. PMID: 31291242 Free PMC article.
"Kankasha" in Kassala: A prospective observational cohort study of the clinical characteristics, epidemiology, genetic origin, and chronic impact of the 2018 epidemic of Chikungunya virus infection in Kassala, Sudan.
Bower H, El Karsany M, Adam AAAH, Idriss MI, Alzain MA, Alfakiyousif MEA, Mohamed R, Mahmoud I, Albadri O, Mahmoud SAA, Abdalla OI, Eldigail M, Elagib N, Arnold U, Gutierrez B, Pybus OG, Carter DP, Pullan ST, Jacob ST, Abdallah TM, Gannon B, Fletcher TE. Bower H, et al. Among authors: carter dp. PLoS Negl Trop Dis. 2021 Apr 30;15(4):e0009387. doi: 10.1371/journal.pntd.0009387. eCollection 2021 Apr. PLoS Negl Trop Dis. 2021. PMID: 33930028 Free PMC article.
32 results