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The evolutionary origin and domestication history of goldfish (Carassius auratus).
Chen D, Zhang Q, Tang W, Huang Z, Wang G, Wang Y, Shi J, Xu H, Lin L, Li Z, Chi W, Huang L, Xia J, Zhang X, Guo L, Wang Y, Ma P, Tang J, Zhou G, Liu M, Liu F, Hua X, Wang B, Shen Q, Jiang Q, Lin J, Chen X, Wang H, Dou M, Liu L, Pan H, Qi Y, Wu B, Fang J, Zhou Y, Cen W, He W, Zhang Q, Xue T, Lin G, Zhang W, Liu Z, Qu L, Wang A, Ye Q, Chen J, Zhang Y, Ming R, Van Montagu M, Tang H, Van de Peer Y, Chen Y, Zhang J. Chen D, et al. Among authors: tang w, tang h, tang j. Proc Natl Acad Sci U S A. 2020 Nov 24;117(47):29775-29785. doi: 10.1073/pnas.2005545117. Epub 2020 Nov 2. Proc Natl Acad Sci U S A. 2020. PMID: 33139555 Free PMC article.
Comparative physical mapping links conservation of microsynteny to chromosome structure and recombination in grasses.
Bowers JE, Arias MA, Asher R, Avise JA, Ball RT, Brewer GA, Buss RW, Chen AH, Edwards TM, Estill JC, Exum HE, Goff VH, Herrick KL, Steele CL, Karunakaran S, Lafayette GK, Lemke C, Marler BS, Masters SL, McMillan JM, Nelson LK, Newsome GA, Nwakanma CC, Odeh RN, Phelps CA, Rarick EA, Rogers CJ, Ryan SP, Slaughter KA, Soderlund CA, Tang H, Wing RA, Paterson AH. Bowers JE, et al. Among authors: tang h. Proc Natl Acad Sci U S A. 2005 Sep 13;102(37):13206-11. doi: 10.1073/pnas.0502365102. Epub 2005 Sep 2. Proc Natl Acad Sci U S A. 2005. PMID: 16141333 Free PMC article.
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, Chen C, Qian W, Shen J, Du P, Eustice M, Tong E, Tang H, Lyons E, Paull RE, Michael TP, Wall K, Rice DW, Albert H, Wang ML, Zhu YJ, Schatz M, Nagarajan N, Acob RA, Guan P, Blas A, Wai CM, Ackerman CM, Ren Y, Liu C, Wang J, Wang J, Na JK, Shakirov EV, Haas B, Thimmapuram J, Nelson D, Wang X, Bowers JE, Gschwend AR, Delcher AL, Singh R, Suzuki JY, Tripathi S, Neupane K, Wei H, Irikura B, Paidi M, Jiang N, Zhang W, Presting G, Windsor A, Navajas-Pérez R, Torres MJ, Feltus FA, Porter B, Li Y, Burroughs AM, Luo MC, Liu L, Christopher DA, Mount SM, Moore PH, Sugimura T, Jiang J, Schuler MA, Friedman V, Mitchell-Olds T, Shippen DE, dePamphilis CW, Palmer JD, Freeling M, Paterson AH, Gonsalves D, Wang L, Alam M. Ming R, et al. Among authors: tang h. Nature. 2008 Apr 24;452(7190):991-6. doi: 10.1038/nature06856. Nature. 2008. PMID: 18432245 Free PMC article.
Synteny and collinearity in plant genomes.
Tang H, Bowers JE, Wang X, Ming R, Alam M, Paterson AH. Tang H, et al. Science. 2008 Apr 25;320(5875):486-8. doi: 10.1126/science.1153917. Science. 2008. PMID: 18436778
ALLMAPS: robust scaffold ordering based on multiple maps.
Tang H, Zhang X, Miao C, Zhang J, Ming R, Schnable JC, Schnable PS, Lyons E, Lu J. Tang H, et al. Genome Biol. 2015 Jan 13;16(1):3. doi: 10.1186/s13059-014-0573-1. Genome Biol. 2015. PMID: 25583564 Free PMC article.
The pineapple genome and the evolution of CAM photosynthesis.
Ming R, VanBuren R, Wai CM, Tang H, Schatz MC, Bowers JE, Lyons E, Wang ML, Chen J, Biggers E, Zhang J, Huang L, Zhang L, Miao W, Zhang J, Ye Z, Miao C, Lin Z, Wang H, Zhou H, Yim WC, Priest HD, Zheng C, Woodhouse M, Edger PP, Guyot R, Guo HB, Guo H, Zheng G, Singh R, Sharma A, Min X, Zheng Y, Lee H, Gurtowski J, Sedlazeck FJ, Harkess A, McKain MR, Liao Z, Fang J, Liu J, Zhang X, Zhang Q, Hu W, Qin Y, Wang K, Chen LY, Shirley N, Lin YR, Liu LY, Hernandez AG, Wright CL, Bulone V, Tuskan GA, Heath K, Zee F, Moore PH, Sunkar R, Leebens-Mack JH, Mockler T, Bennetzen JL, Freeling M, Sankoff D, Paterson AH, Zhu X, Yang X, Smith JA, Cushman JC, Paull RE, Yu Q. Ming R, et al. Among authors: tang h. Nat Genet. 2015 Dec;47(12):1435-42. doi: 10.1038/ng.3435. Epub 2015 Nov 2. Nat Genet. 2015. PMID: 26523774 Free PMC article.
Wild tobacco genomes reveal the evolution of nicotine biosynthesis.
Xu S, Brockmöller T, Navarro-Quezada A, Kuhl H, Gase K, Ling Z, Zhou W, Kreitzer C, Stanke M, Tang H, Lyons E, Pandey P, Pandey SP, Timmermann B, Gaquerel E, Baldwin IT. Xu S, et al. Among authors: tang h. Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):6133-6138. doi: 10.1073/pnas.1700073114. Epub 2017 May 23. Proc Natl Acad Sci U S A. 2017. PMID: 28536194 Free PMC article.
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