Cassidy CK - Search Results

1

Dynamics of an LPS translocon induced by substrate and an antimicrobial peptide.

Fiorentino F, Sauer JB, Qiu X, Corey RA, Cassidy CK, Mynors-Wallis B, Mehmood S, Bolla JR, Stansfeld PJ, Robinson CV. Fiorentino F, et al. Among authors: cassidy ck. Nat Chem Biol. 2021 Feb;17(2):187-195. doi: 10.1038/s41589-020-00694-2. Epub 2020 Nov 16. Nat Chem Biol. 2021. PMID: 33199913 Free PMC article.

2

Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations.

Cassidy CK, Himes BA, Sun D, Ma J, Zhao G, Parkinson JS, Stansfeld PJ, Luthey-Schulten Z, Zhang P. Cassidy CK, et al. Commun Biol. 2020 Jan 10;3(1):24. doi: 10.1038/s42003-019-0748-0. Commun Biol. 2020. PMID: 31925330 Free PMC article.

3

Complete structure of the chemosensory array core signalling unit in an E. coli minicell strain.

Burt A, Cassidy CK, Ames P, Bacia-Verloop M, Baulard M, Huard K, Luthey-Schulten Z, Desfosses A, Stansfeld PJ, Margolin W, Parkinson JS, Gutsche I. Burt A, et al. Among authors: cassidy ck. Nat Commun. 2020 Feb 6;11(1):743. doi: 10.1038/s41467-020-14350-9. Nat Commun. 2020. PMID: 32029744 Free PMC article.

4

The Unconventional Cytoplasmic Sensing Mechanism for Ethanol Chemotaxis in Bacillus subtilis.

Tohidifar P, Bodhankar GA, Pei S, Cassidy CK, Walukiewicz HE, Ordal GW, Stansfeld PJ, Rao CV. Tohidifar P, et al. Among authors: cassidy ck. mBio. 2020 Oct 6;11(5):e02177-20. doi: 10.1128/mBio.02177-20. mBio. 2020. PMID: 33024039 Free PMC article.

5

Alternative Architecture of the E. coli Chemosensory Array.

Burt A, Cassidy CK, Stansfeld PJ, Gutsche I. Burt A, et al. Among authors: cassidy ck. Biomolecules. 2021 Mar 25;11(4):495. doi: 10.3390/biom11040495. Biomolecules. 2021. PMID: 33806045 Free PMC article.

6

A Bacterial Inflammation Sensor Regulates c-di-GMP Signaling, Adhesion, and Biofilm Formation.

Perkins A, Tudorica DA, Teixeira RD, Schirmer T, Zumwalt L, Ogba OM, Cassidy CK, Stansfeld PJ, Guillemin K. Perkins A, et al. Among authors: cassidy ck. mBio. 2021 Jun 29;12(3):e0017321. doi: 10.1128/mBio.00173-21. Epub 2021 Jun 22. mBio. 2021. PMID: 34154415 Free PMC article.

7

PyLipID: A Python Package for Analysis of Protein-Lipid Interactions from Molecular Dynamics Simulations.

Song W, Corey RA, Ansell TB, Cassidy CK, Horrell MR, Duncan AL, Stansfeld PJ, Sansom MSP. Song W, et al. Among authors: cassidy ck. J Chem Theory Comput. 2022 Feb 8;18(2):1188-1201. doi: 10.1021/acs.jctc.1c00708. Epub 2022 Jan 12. J Chem Theory Comput. 2022. PMID: 35020380 Free PMC article.

8

Structure of the native chemotaxis core signaling unit from phage E-protein lysed E. coli cells.

Cassidy CK, Qin Z, Frosio T, Gosink K, Yang Z, Sansom MSP, Stansfeld PJ, Parkinson JS, Zhang P. Cassidy CK, et al. mBio. 2023 Oct 31;14(5):e0079323. doi: 10.1128/mbio.00793-23. Epub 2023 Sep 29. mBio. 2023. PMID: 37772839 Free PMC article.

9

LipIDens: simulation assisted interpretation of lipid densities in cryo-EM structures of membrane proteins.

Ansell TB, Song W, Coupland CE, Carrique L, Corey RA, Duncan AL, Cassidy CK, Geurts MMG, Rasmussen T, Ward AB, Siebold C, Stansfeld PJ, Sansom MSP. Ansell TB, et al. Among authors: cassidy ck. Nat Commun. 2023 Nov 27;14(1):7774. doi: 10.1038/s41467-023-43392-y. Nat Commun. 2023. PMID: 38012131 Free PMC article.

10

Molecular dynamics simulations of large macromolecular complexes.

Perilla JR, Goh BC, Cassidy CK, Liu B, Bernardi RC, Rudack T, Yu H, Wu Z, Schulten K. Perilla JR, et al. Among authors: cassidy ck. Curr Opin Struct Biol. 2015 Apr;31:64-74. doi: 10.1016/j.sbi.2015.03.007. Epub 2015 Apr 4. Curr Opin Struct Biol. 2015. PMID: 25845770 Free PMC article. Review.

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