Poch O - Search Results

1

Proteome-Scale Detection of Differential Conservation Patterns at Protein and Subprotein Levels with BLUR.

Defosset A, Kress A, Nevers Y, Ripp R, Thompson JD, Poch O, Lecompte O. Defosset A, et al. Among authors: poch o. Genome Biol Evol. 2021 Jan 7;13(1):evaa248. doi: 10.1093/gbe/evaa248. Genome Biol Evol. 2021. PMID: 33211099 Free PMC article.

2

BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs.

Thompson JD, Plewniak F, Poch O. Thompson JD, et al. Among authors: poch o. Bioinformatics. 1999 Jan;15(1):87-8. doi: 10.1093/bioinformatics/15.1.87. Bioinformatics. 1999. PMID: 10068696

3

A comprehensive comparison of multiple sequence alignment programs.

Thompson JD, Plewniak F, Poch O. Thompson JD, et al. Among authors: poch o. Nucleic Acids Res. 1999 Jul 1;27(13):2682-90. doi: 10.1093/nar/27.13.2682. Nucleic Acids Res. 1999. PMID: 10373585 Free PMC article.

4

DbClustal: rapid and reliable global multiple alignments of protein sequences detected by database searches.

Thompson JD, Plewniak F, Thierry J, Poch O. Thompson JD, et al. Among authors: poch o. Nucleic Acids Res. 2000 Aug 1;28(15):2919-26. doi: 10.1093/nar/28.15.2919. Nucleic Acids Res. 2000. PMID: 10908355 Free PMC article.

5

Ballast: blast post-processing based on locally conserved segments.

Plewniak F, Thompson JD, Poch O. Plewniak F, et al. Among authors: poch o. Bioinformatics. 2000 Sep;16(9):750-9. doi: 10.1093/bioinformatics/16.9.750. Bioinformatics. 2000. PMID: 11108697

6

BAliBASE (Benchmark Alignment dataBASE): enhancements for repeats, transmembrane sequences and circular permutations.

Bahr A, Thompson JD, Thierry JC, Poch O. Bahr A, et al. Among authors: poch o. Nucleic Acids Res. 2001 Jan 1;29(1):323-6. doi: 10.1093/nar/29.1.323. Nucleic Acids Res. 2001. PMID: 11125126 Free PMC article.

7

Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea.

Lecompte O, Ripp R, Puzos-Barbe V, Duprat S, Heilig R, Dietrich J, Thierry JC, Poch O. Lecompte O, et al. Among authors: poch o. Genome Res. 2001 Jun;11(6):981-93. doi: 10.1101/gr.gr1653r. Genome Res. 2001. PMID: 11381026 Free PMC article.

8

Multiple alignment of complete sequences (MACS) in the post-genomic era.

Lecompte O, Thompson JD, Plewniak F, Thierry J, Poch O. Lecompte O, et al. Among authors: poch o. Gene. 2001 May 30;270(1-2):17-30. doi: 10.1016/s0378-1119(01)00461-9. Gene. 2001. PMID: 11403999 Review.

9

Towards a reliable objective function for multiple sequence alignments.

Thompson JD, Plewniak F, Ripp R, Thierry JC, Poch O. Thompson JD, et al. Among authors: poch o. J Mol Biol. 2001 Dec 7;314(4):937-51. doi: 10.1006/jmbi.2001.5187. J Mol Biol. 2001. PMID: 11734009

10

Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale.

Lecompte O, Ripp R, Thierry JC, Moras D, Poch O. Lecompte O, et al. Among authors: poch o. Nucleic Acids Res. 2002 Dec 15;30(24):5382-90. doi: 10.1093/nar/gkf693. Nucleic Acids Res. 2002. PMID: 12490706 Free PMC article.

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