Cockram CA - Search Results

1

4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen Leptospira interrogans.

Gaultney RA, Vincent AT, Lorioux C, Coppée JY, Sismeiro O, Varet H, Legendre R, Cockram CA, Veyrier FJ, Picardeau M. Gaultney RA, et al. Among authors: cockram ca. Nucleic Acids Res. 2020 Dec 2;48(21):12102-12115. doi: 10.1093/nar/gkaa966. Nucleic Acids Res. 2020. PMID: 33301041 Free PMC article.

2

Extended sister-chromosome catenation leads to massive reorganization of the E. coli genome.

Conin B, Billault-Chaumartin I, El Sayyed H, Quenech'Du N, Cockram C, Koszul R, Espéli O. Conin B, et al. Nucleic Acids Res. 2022 Mar 21;50(5):2635-2650. doi: 10.1093/nar/gkac105. Nucleic Acids Res. 2022. PMID: 35212387 Free PMC article.

3

Generation of gene-level resolution chromosome contact maps in bacteria and archaea.

Cockram C, Thierry A, Koszul R. Cockram C, et al. STAR Protoc. 2021 May 5;2(2):100512. doi: 10.1016/j.xpro.2021.100512. eCollection 2021 Jun 18. STAR Protoc. 2021. PMID: 34027477 Free PMC article.

4

Management of E. coli sister chromatid cohesion in response to genotoxic stress.

Vickridge E, Planchenault C, Cockram C, Junceda IG, Espéli O. Vickridge E, et al. Nat Commun. 2017 Mar 6;8:14618. doi: 10.1038/ncomms14618. Nat Commun. 2017. PMID: 28262707 Free PMC article.

5

Euryarchaeal genomes are folded into SMC-dependent loops and domains, but lack transcription-mediated compartmentalization.

Cockram C, Thierry A, Gorlas A, Lestini R, Koszul R. Cockram C, et al. Mol Cell. 2021 Feb 4;81(3):459-472.e10. doi: 10.1016/j.molcel.2020.12.013. Epub 2020 Dec 30. Mol Cell. 2021. PMID: 33382984 Free article.

6

Generating High-Resolution Hi-C Contact Maps of Bacteria.

Thierry A, Cockram C. Thierry A, et al. Methods Mol Biol. 2022;2301:183-195. doi: 10.1007/978-1-0716-1390-0_9. Methods Mol Biol. 2022. PMID: 34415536 Free article.

7

Distribution of Holliday junctions and repair forks during Escherichia coli DNA double-strand break repair.

Yasmin T, Azeroglu B, Cockram CA, Leach DRF. Yasmin T, et al. Among authors: cockram ca. PLoS Genet. 2021 Aug 25;17(8):e1009717. doi: 10.1371/journal.pgen.1009717. eCollection 2021 Aug. PLoS Genet. 2021. PMID: 34432790 Free PMC article.

8

RecG Directs DNA Synthesis during Double-Strand Break Repair.

Azeroglu B, Mawer JS, Cockram CA, White MA, Hasan AM, Filatenkova M, Leach DR. Azeroglu B, et al. Among authors: cockram ca. PLoS Genet. 2016 Feb 12;12(2):e1005799. doi: 10.1371/journal.pgen.1005799. eCollection 2016 Feb. PLoS Genet. 2016. PMID: 26872352 Free PMC article.

9

Quantitative genomic analysis of RecA protein binding during DNA double-strand break repair reveals RecBCD action in vivo.

Cockram CA, Filatenkova M, Danos V, El Karoui M, Leach DR. Cockram CA, et al. Proc Natl Acad Sci U S A. 2015 Aug 25;112(34):E4735-42. doi: 10.1073/pnas.1424269112. Epub 2015 Aug 10. Proc Natl Acad Sci U S A. 2015. PMID: 26261330 Free PMC article.

10

Multiplex assays for the identification of serological signatures of SARS-CoV-2 infection: an antibody-based diagnostic and machine learning study.

Rosado J, Pelleau S, Cockram C, Merkling SH, Nekkab N, Demeret C, Meola A, Kerneis S, Terrier B, Fafi-Kremer S, de Seze J, Bruel T, Dejardin F, Petres S, Longley R, Fontanet A, Backovic M, Mueller I, White MT. Rosado J, et al. Lancet Microbe. 2021 Feb;2(2):e60-e69. doi: 10.1016/S2666-5247(20)30197-X. Epub 2020 Dec 21. Lancet Microbe. 2021. PMID: 33521709 Free PMC article.

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