Vanegas JM - Search Results

1

Mechanical Activation of MscL Revealed by a Locally Distributed Tension Molecular Dynamics Approach.

Rajeshwar T R, Anishkin A, Sukharev S, Vanegas JM. Rajeshwar T R, et al. Among authors: vanegas jm. Biophys J. 2021 Jan 19;120(2):232-242. doi: 10.1016/j.bpj.2020.11.2274. Epub 2020 Dec 15. Biophys J. 2021. PMID: 33333032 Free PMC article.

2

Nanoconfinement of Carbon Dioxide within Interfacial Aqueous/Ionic Liquid Systems.

Leverant CJ, Richards D, Spoerke ED, Alcala R, Jiang YB, Percival SJ, Vanegas JM, Rempe SB. Leverant CJ, et al. Among authors: vanegas jm. Langmuir. 2024 May 21;40(20):10615-10622. doi: 10.1021/acs.langmuir.4c00542. Epub 2024 May 8. Langmuir. 2024. PMID: 38716958

3

Structural basis of bulk lipid transfer by bridge-like lipid transfer protein LPD-3.

Kang Y, Lehmann KS, Vanegas J, Long H, Jefferson A, Freeman M, Clark S. Kang Y, et al. bioRxiv [Preprint]. 2024 Jun 22:2024.06.21.600134. doi: 10.1101/2024.06.21.600134. bioRxiv. 2024. PMID: 38948693 Free PMC article. Preprint.

4

Catalytic Role of the Substrate Defines Specificity of Therapeutic l-Asparaginase.

Anishkin A, Vanegas JM, Rogers DM, Lorenzi PL, Chan WK, Purwaha P, Weinstein JN, Sukharev S, Rempe SB. Anishkin A, et al. Among authors: vanegas jm. J Mol Biol. 2015 Aug 28;427(17):2867-85. doi: 10.1016/j.jmb.2015.06.017. Epub 2015 Jul 2. J Mol Biol. 2015. PMID: 26142822

5

Mechanism of Catalysis by l-Asparaginase.

Lubkowski J, Vanegas J, Chan WK, Lorenzi PL, Weinstein JN, Sukharev S, Fushman D, Rempe S, Anishkin A, Wlodawer A. Lubkowski J, et al. Biochemistry. 2020 May 26;59(20):1927-1945. doi: 10.1021/acs.biochem.0c00116. Epub 2020 May 11. Biochemistry. 2020. PMID: 32364696

6

Membrane mediated mechanical stimuli produces distinct active-like states in the AT1 receptor.

Poudel B, Rajeshwar T R, Vanegas JM. Poudel B, et al. Among authors: vanegas jm. Nat Commun. 2023 Aug 4;14(1):4690. doi: 10.1038/s41467-023-40433-4. Nat Commun. 2023. PMID: 37542033 Free PMC article.

7

Force transduction and lipid binding in MscL: a continuum-molecular approach.

Vanegas JM, Arroyo M. Vanegas JM, et al. PLoS One. 2014 Dec 1;9(12):e113947. doi: 10.1371/journal.pone.0113947. eCollection 2014. PLoS One. 2014. PMID: 25437007 Free PMC article.

8

Balance of Solvent and Chain Interactions Determines the Local Stress State of Simulated Membranes.

Winkeljohn CM, Himberg B, Vanegas JM. Winkeljohn CM, et al. Among authors: vanegas jm. J Phys Chem B. 2020 Aug 13;124(32):6963-6971. doi: 10.1021/acs.jpcb.0c03937. Epub 2020 Aug 5. J Phys Chem B. 2020. PMID: 32667795

9

Combined molecular/continuum modeling reveals the role of friction during fast unfolding of coiled-coil proteins.

Torres-Sánchez A , Vanegas JM , Purohit PK , Arroyo M . Torres-Sánchez A , et al. Among authors: vanegas jm. Soft Matter. 2019 Jun 19;15(24):4961-4975. doi: 10.1039/c9sm00117d. Soft Matter. 2019. PMID: 31172154

10

Insertion of Dengue E into lipid bilayers studied by neutron reflectivity and molecular dynamics simulations.

Vanegas JM, Heinrich F, Rogers DM, Carson BD, La Bauve S, Vernon BC, Akgun B, Satija S, Zheng A, Kielian M, Rempe SB, Kent MS. Vanegas JM, et al. Biochim Biophys Acta Biomembr. 2018 May;1860(5):1216-1230. doi: 10.1016/j.bbamem.2018.02.012. Epub 2018 Feb 13. Biochim Biophys Acta Biomembr. 2018. PMID: 29447917 Free PMC article.

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