Carpenter AE - Search Results

1

Molecular Diversity of Glutamatergic and GABAergic Synapses from Multiplexed Fluorescence Imaging.

Danielson E, Perez de Arce K, Cimini B, Wamhoff EC, Singh S, Cottrell JR, Carpenter AE, Bathe M. Danielson E, et al. Among authors: carpenter ae. eNeuro. 2021 Feb 5;8(1):ENEURO.0286-20.2020. doi: 10.1523/ENEURO.0286-20.2020. Print 2021 Jan-Feb. eNeuro. 2021. PMID: 33355295 Free PMC article.

2

Comparison of methods for image-based profiling of cellular morphological responses to small-molecule treatment.

Ljosa V, Caie PD, Ter Horst R, Sokolnicki KL, Jenkins EL, Daya S, Roberts ME, Jones TR, Singh S, Genovesio A, Clemons PA, Carragher NO, Carpenter AE. Ljosa V, et al. Among authors: carpenter ae. J Biomol Screen. 2013 Dec;18(10):1321-9. doi: 10.1177/1087057113503553. Epub 2013 Sep 17. J Biomol Screen. 2013. PMID: 24045582 Free PMC article.

3

Increasing the Content of High-Content Screening: An Overview.

Singh S, Carpenter AE, Genovesio A. Singh S, et al. Among authors: carpenter ae. J Biomol Screen. 2014 Jun;19(5):640-50. doi: 10.1177/1087057114528537. Epub 2014 Apr 7. J Biomol Screen. 2014. PMID: 24710339 Free PMC article. Review.

4

Pipeline for illumination correction of images for high-throughput microscopy.

Singh S, Bray MA, Jones TR, Carpenter AE. Singh S, et al. Among authors: carpenter ae. J Microsc. 2014 Dec;256(3):231-6. doi: 10.1111/jmi.12178. Epub 2014 Sep 16. J Microsc. 2014. PMID: 25228240 Free PMC article.

5

Morphological Profiles of RNAi-Induced Gene Knockdown Are Highly Reproducible but Dominated by Seed Effects.

Singh S, Wu X, Ljosa V, Bray MA, Piccioni F, Root DE, Doench JG, Boehm JS, Carpenter AE. Singh S, et al. Among authors: carpenter ae. PLoS One. 2015 Jul 21;10(7):e0131370. doi: 10.1371/journal.pone.0131370. eCollection 2015. PLoS One. 2015. PMID: 26197079 Free PMC article.

6

CP-CHARM: segmentation-free image classification made accessible.

Uhlmann V, Singh S, Carpenter AE. Uhlmann V, et al. Among authors: carpenter ae. BMC Bioinformatics. 2016 Jan 27;17:51. doi: 10.1186/s12859-016-0895-y. BMC Bioinformatics. 2016. PMID: 26817459 Free PMC article.

7

Applications in image-based profiling of perturbations.

Caicedo JC, Singh S, Carpenter AE. Caicedo JC, et al. Among authors: carpenter ae. Curr Opin Biotechnol. 2016 Jun;39:134-142. doi: 10.1016/j.copbio.2016.04.003. Epub 2016 Apr 17. Curr Opin Biotechnol. 2016. PMID: 27089218 Free article. Review.

8

CellProfiler Analyst: interactive data exploration, analysis and classification of large biological image sets.

Dao D, Fraser AN, Hung J, Ljosa V, Singh S, Carpenter AE. Dao D, et al. Among authors: carpenter ae. Bioinformatics. 2016 Oct 15;32(20):3210-3212. doi: 10.1093/bioinformatics/btw390. Epub 2016 Jun 26. Bioinformatics. 2016. PMID: 27354701 Free PMC article.

9

Cell Painting, a high-content image-based assay for morphological profiling using multiplexed fluorescent dyes.

Bray MA, Singh S, Han H, Davis CT, Borgeson B, Hartland C, Kost-Alimova M, Gustafsdottir SM, Gibson CC, Carpenter AE. Bray MA, et al. Among authors: carpenter ae. Nat Protoc. 2016 Sep;11(9):1757-74. doi: 10.1038/nprot.2016.105. Epub 2016 Aug 25. Nat Protoc. 2016. PMID: 27560178 Free PMC article.

10

Systematic morphological profiling of human gene and allele function via Cell Painting.

Rohban MH, Singh S, Wu X, Berthet JB, Bray MA, Shrestha Y, Varelas X, Boehm JS, Carpenter AE. Rohban MH, et al. Among authors: carpenter ae. Elife. 2017 Mar 18;6:e24060. doi: 10.7554/eLife.24060. Elife. 2017. PMID: 28315521 Free PMC article.

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